Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:152306548-152376551

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Icmt 4 152297227 to 152307121 9894 + protein coding gene isoprenylcysteine carboxyl methyltransferase
Rnf207 4 152307019 to 152318993 11974 - protein coding gene ring finger protein 207
Cpgi15408 4 152312933 to 152313686 753 CpG island CpG island 15408
Cpgi15409 4 152315450 to 152316272 822 CpG island CpG island 15409
Tssr44830 4 152317748 to 152317759 11 - TSS region transcription start site region 44830
Tssr44831 4 152317813 to 152317824 11 - TSS region transcription start site region 44831
Tssr44832 4 152318569 to 152318654 85 - TSS region transcription start site region 44832
Cpgi15410 4 152318696 to 152319155 459 CpG island CpG island 15410
Tssr40546 4 152318723 to 152318759 36 + TSS region transcription start site region 40546
Tssr44833 4 152319000 to 152319014 14 - TSS region transcription start site region 44833
9430083M05Rik 4 152321318 to 152324725 3407 - lncRNA gene RIKEN cDNA 9430083M05 gene
Cpgi15411 4 152325553 to 152326591 1038 CpG island CpG island 15411
Rpl22 4 152325742 to 152334071 8329 + protein coding gene ribosomal protein L22
Tssr40547 4 152325831 to 152325876 45 + TSS region transcription start site region 40547
Tssr40548 4 152330053 to 152330072 19 + TSS region transcription start site region 40548
Tssr44834 4 152332409 to 152332434 25 - TSS region transcription start site region 44834
Cpgi15412 4 152338227 to 152339992 1765 CpG island CpG island 15412
Tssr40549 4 152338619 to 152338709 90 + TSS region transcription start site region 40549
Chd5 4 152338651 to 152390194 51543 + protein coding gene chromodomain helicase DNA binding protein 5
Tssr40550 4 152338717 to 152338762 45 + TSS region transcription start site region 40550
Tssr40551 4 152338815 to 152338845 30 + TSS region transcription start site region 40551
Tssr40552 4 152338914 to 152338967 53 + TSS region transcription start site region 40552
Tssr40553 4 152338974 to 152338998 24 + TSS region transcription start site region 40553
Tssr40554 4 152341548 to 152341551 3 + TSS region transcription start site region 40554
Tssr40555 4 152341554 to 152341573 19 + TSS region transcription start site region 40555
Gm13645 4 152352198 to 152353641 1443 - unclassified non-coding RNA gene predicted gene 13645
Tssr40556 4 152353591 to 152353604 13 + TSS region transcription start site region 40556
Cpgi15413 4 152360493 to 152361277 784 CpG island CpG island 15413
Tssr44835 4 152361017 to 152361025 8 - TSS region transcription start site region 44835