Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:152161968-152321977

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hes2 4 152158867 to 152162469 3602 + protein coding gene hes family bHLH transcription factor 2
Gm30622 4 152163762 to 152166419 2657 + lncRNA gene predicted gene, 30622
Cpgi15398 4 152165602 to 152165900 298 CpG island CpG island 15398
Cpgi15399 4 152170589 to 152170898 309 CpG island CpG island 15399
Cpgi15400 4 152177438 to 152178902 1464 CpG island CpG island 15400
Tssr40515 4 152177812 to 152177827 15 + TSS region transcription start site region 40515
Tssr40516 4 152177945 to 152177951 6 + TSS region transcription start site region 40516
Tssr40517 4 152177957 to 152178013 56 + TSS region transcription start site region 40517
Tssr40518 4 152178016 to 152178030 14 + TSS region transcription start site region 40518
Tssr40519 4 152178035 to 152178044 9 + TSS region transcription start site region 40519
Tssr44824 4 152178036 to 152178076 40 - TSS region transcription start site region 44824
Tssr40520 4 152178105 to 152178112 7 + TSS region transcription start site region 40520
Tssr40521 4 152178126 to 152178166 40 + TSS region transcription start site region 40521
Acot7 4 152178134 to 152271855 93721 + protein coding gene acyl-CoA thioesterase 7
Tssr40522 4 152178173 to 152178208 35 + TSS region transcription start site region 40522
Tssr40523 4 152178210 to 152178230 20 + TSS region transcription start site region 40523
Tssr40524 4 152178237 to 152178259 22 + TSS region transcription start site region 40524
Tssr40525 4 152185995 to 152186006 11 + TSS region transcription start site region 40525
Tssr40526 4 152186054 to 152186094 40 + TSS region transcription start site region 40526
Tssr40527 4 152186179 to 152186206 27 + TSS region transcription start site region 40527
Tssr40528 4 152190048 to 152190080 32 + TSS region transcription start site region 40528
Tssr40529 4 152190504 to 152190530 26 + TSS region transcription start site region 40529
Tssr40530 4 152199805 to 152199821 16 + TSS region transcription start site region 40530
Tssr40531 4 152199822 to 152199872 50 + TSS region transcription start site region 40531
Tssr1390 4 152199889 to 152199899 10 + TSS region transcription start site region 1390
Tssr40532 4 152199996 to 152200039 43 + TSS region transcription start site region 40532
Gm27500 4 152201807 to 152202142 335 - unclassified non-coding RNA gene predicted gene, 27500
Gm13096 4 152203926 to 152204467 541 + sense intronic lncRNA gene predicted gene 13096
Tssr40533 4 152217247 to 152217254 7 + TSS region transcription start site region 40533
Tssr1391 4 152224342 to 152224383 41 + TSS region transcription start site region 1391
Tssr40534 4 152241968 to 152241977 9 + TSS region transcription start site region 40534
Tssr40535 4 152242014 to 152242023 9 + TSS region transcription start site region 40535
Cpgi15401 4 152273565 to 152275117 1552 CpG island CpG island 15401
Tssr40536 4 152274090 to 152274163 73 + TSS region transcription start site region 40536
Tssr40537 4 152274191 to 152274232 41 + TSS region transcription start site region 40537
Gpr153 4 152274232 to 152285337 11105 + protein coding gene G protein-coupled receptor 153
Cpgi15402 4 152279104 to 152279394 290 CpG island CpG island 15402
Cpgi15403 4 152282382 to 152284072 1690 CpG island CpG island 15403
Hes3 4 152285972 to 152291662 5690 - protein coding gene hes family bHLH transcription factor 3
Cpgi15404 4 152286098 to 152287338 1240 CpG island CpG island 15404
Tssr44825 4 152288070 to 152288074 4 - TSS region transcription start site region 44825
Cpgi15405 4 152290260 to 152290902 642 CpG island CpG island 15405
Cpgi15406 4 152291153 to 152291310 157 CpG island CpG island 15406
Tssr44826 4 152291655 to 152291659 4 - TSS region transcription start site region 44826
Tssr44827 4 152291663 to 152291672 9 - TSS region transcription start site region 44827
Tssr40538 4 152296166 to 152296180 14 + TSS region transcription start site region 40538
Tssr40539 4 152296200 to 152296221 21 + TSS region transcription start site region 40539
Cpgi15407 4 152296776 to 152298065 1289 CpG island CpG island 15407
Tssr40540 4 152297205 to 152297220 15 + TSS region transcription start site region 40540
Icmt 4 152297227 to 152307121 9894 + protein coding gene isoprenylcysteine carboxyl methyltransferase
Tssr40541 4 152297250 to 152297255 5 + TSS region transcription start site region 40541
Tssr40542 4 152297260 to 152297273 13 + TSS region transcription start site region 40542
Tssr40543 4 152297274 to 152297326 52 + TSS region transcription start site region 40543
Tssr40544 4 152297329 to 152297368 39 + TSS region transcription start site region 40544
Tssr40545 4 152297489 to 152297500 11 + TSS region transcription start site region 40545
Tssr44828 4 152305263 to 152305270 7 - TSS region transcription start site region 44828
Tssr44829 4 152305271 to 152305283 12 - TSS region transcription start site region 44829
Rnf207 4 152307019 to 152318993 11974 - protein coding gene ring finger protein 207
Cpgi15408 4 152312933 to 152313686 753 CpG island CpG island 15408
Cpgi15409 4 152315450 to 152316272 822 CpG island CpG island 15409
Tssr44830 4 152317748 to 152317759 11 - TSS region transcription start site region 44830
Tssr44831 4 152317813 to 152317824 11 - TSS region transcription start site region 44831
Tssr44832 4 152318569 to 152318654 85 - TSS region transcription start site region 44832
Cpgi15410 4 152318696 to 152319155 459 CpG island CpG island 15410
Tssr40546 4 152318723 to 152318759 36 + TSS region transcription start site region 40546
Tssr44833 4 152319000 to 152319014 14 - TSS region transcription start site region 44833
9430083M05Rik 4 152321318 to 152324725 3407 - lncRNA gene RIKEN cDNA 9430083M05 gene