Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:152109574-152209589

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plekhg5 4 152072498 to 152115400 42902 + protein coding gene pleckstrin homology domain containing, family G (with RhoGef domain) member 5
Tssr40500 4 152113827 to 152113853 26 + TSS region transcription start site region 40500
Cpgi15389 4 152115776 to 152116297 521 CpG island CpG island 15389
Tnfrsf25 4 152115934 to 152120119 4185 + protein coding gene tumor necrosis factor receptor superfamily, member 25
Tssr40501 4 152116017 to 152116028 11 + TSS region transcription start site region 40501
Tssr40502 4 152116036 to 152116080 44 + TSS region transcription start site region 40502
Tssr40503 4 152116277 to 152116284 7 + TSS region transcription start site region 40503
Tssr40504 4 152116312 to 152116337 25 + TSS region transcription start site region 40504
Tssr40505 4 152116392 to 152116402 10 + TSS region transcription start site region 40505
Tssr40506 4 152116434 to 152116443 9 + TSS region transcription start site region 40506
Tssr44805 4 152117629 to 152117638 9 - TSS region transcription start site region 44805
Cpgi15390 4 152119459 to 152119932 473 CpG island CpG island 15390
Espn 4 152120331 to 152152371 32040 - protein coding gene espin
Tssr44806 4 152120653 to 152120670 17 - TSS region transcription start site region 44806
Cpgi15391 4 152120745 to 152121318 573 CpG island CpG island 15391
Tssr44807 4 152120793 to 152120801 8 - TSS region transcription start site region 44807
Tssr40507 4 152124586 to 152124613 27 + TSS region transcription start site region 40507
Tssr40508 4 152124863 to 152124891 28 + TSS region transcription start site region 40508
Cpgi15392 4 152124880 to 152126872 1992 CpG island CpG island 15392
Tssr40509 4 152125078 to 152125089 11 + TSS region transcription start site region 40509
Gm17852 4 152125114 to 152126863 1749 - pseudogene predicted gene, 17852
Tssr40510 4 152125123 to 152125133 10 + TSS region transcription start site region 40510
Tssr44808 4 152125992 to 152126001 9 - TSS region transcription start site region 44808
Tssr40511 4 152127162 to 152127165 3 + TSS region transcription start site region 40511
Tssr44809 4 152128858 to 152128898 40 - TSS region transcription start site region 44809
Tssr40512 4 152128988 to 152129003 15 + TSS region transcription start site region 40512
Tssr40513 4 152129041 to 152129052 11 + TSS region transcription start site region 40513
Cpgi15393 4 152130295 to 152132483 2188 CpG island CpG island 15393
Tssr44810 4 152131333 to 152131336 3 - TSS region transcription start site region 44810
Tssr44811 4 152131410 to 152131420 10 - TSS region transcription start site region 44811
Tssr44812 4 152131426 to 152131447 21 - TSS region transcription start site region 44812
Tssr44813 4 152131458 to 152131486 28 - TSS region transcription start site region 44813
Tssr44814 4 152131490 to 152131505 15 - TSS region transcription start site region 44814
Tssr44815 4 152131689 to 152131709 20 - TSS region transcription start site region 44815
Tssr44816 4 152131747 to 152131763 16 - TSS region transcription start site region 44816
Tssr44817 4 152131787 to 152131801 14 - TSS region transcription start site region 44817
Tssr44818 4 152131813 to 152131829 16 - TSS region transcription start site region 44818
Tssr44819 4 152131873 to 152131886 13 - TSS region transcription start site region 44819
Tssr44820 4 152132345 to 152132361 16 - TSS region transcription start site region 44820
Tssr44821 4 152132397 to 152132415 18 - TSS region transcription start site region 44821
Cpgi15394 4 152138316 to 152139218 902 CpG island CpG island 15394
Tssr44822 4 152138774 to 152138803 29 - TSS region transcription start site region 44822
Cpgi15395 4 152151809 to 152152554 745 CpG island CpG island 15395
Tssr44823 4 152152381 to 152152397 16 - TSS region transcription start site region 44823
Cpgi15396 4 152153557 to 152154138 581 CpG island CpG island 15396
Gm13077 4 152157007 to 152157490 483 - pseudogene predicted gene 13077
Cpgi15397 4 152158611 to 152160651 2040 CpG island CpG island 15397
Hes2 4 152158867 to 152162469 3602 + protein coding gene hes family bHLH transcription factor 2
Tssr40514 4 152159574 to 152159589 15 + TSS region transcription start site region 40514
Gm30622 4 152163762 to 152166419 2657 + lncRNA gene predicted gene, 30622
Cpgi15398 4 152165602 to 152165900 298 CpG island CpG island 15398
Cpgi15399 4 152170589 to 152170898 309 CpG island CpG island 15399
Cpgi15400 4 152177438 to 152178902 1464 CpG island CpG island 15400
Tssr40515 4 152177812 to 152177827 15 + TSS region transcription start site region 40515
Tssr40516 4 152177945 to 152177951 6 + TSS region transcription start site region 40516
Tssr40517 4 152177957 to 152178013 56 + TSS region transcription start site region 40517
Tssr40518 4 152178016 to 152178030 14 + TSS region transcription start site region 40518
Tssr40519 4 152178035 to 152178044 9 + TSS region transcription start site region 40519
Tssr44824 4 152178036 to 152178076 40 - TSS region transcription start site region 44824
Tssr40520 4 152178105 to 152178112 7 + TSS region transcription start site region 40520
Tssr40521 4 152178126 to 152178166 40 + TSS region transcription start site region 40521
Acot7 4 152178134 to 152271855 93721 + protein coding gene acyl-CoA thioesterase 7
Tssr40522 4 152178173 to 152178208 35 + TSS region transcription start site region 40522
Tssr40523 4 152178210 to 152178230 20 + TSS region transcription start site region 40523
Tssr40524 4 152178237 to 152178259 22 + TSS region transcription start site region 40524
Tssr40525 4 152185995 to 152186006 11 + TSS region transcription start site region 40525
Tssr40526 4 152186054 to 152186094 40 + TSS region transcription start site region 40526
Tssr40527 4 152186179 to 152186206 27 + TSS region transcription start site region 40527
Tssr40528 4 152190048 to 152190080 32 + TSS region transcription start site region 40528
Tssr40529 4 152190504 to 152190530 26 + TSS region transcription start site region 40529
Tssr40530 4 152199805 to 152199821 16 + TSS region transcription start site region 40530
Tssr40531 4 152199822 to 152199872 50 + TSS region transcription start site region 40531
Tssr1390 4 152199889 to 152199899 10 + TSS region transcription start site region 1390
Tssr40532 4 152199996 to 152200039 43 + TSS region transcription start site region 40532
Gm27500 4 152201807 to 152202142 335 - unclassified non-coding RNA gene predicted gene, 27500
Gm13096 4 152203926 to 152204467 541 + sense intronic lncRNA gene predicted gene 13096