Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:150676226-150918152

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcmd2 4 133427367 to 150704994 17277627 QTL B cell maturation defect 2
Gm16079 4 150668248 to 150678792 10544 - lincRNA gene predicted gene 16079
Tssr40436 4 150678137 to 150678141 4 + TSS region transcription start site region 40436
Tssr44751 4 150678756 to 150678766 10 - TSS region transcription start site region 44751
Cpgi15355 4 150678825 to 150679173 348 CpG island CpG island 15355
Tssr44752 4 150686510 to 150686515 5 - TSS region transcription start site region 44752
Tssr44753 4 150687129 to 150687134 5 - TSS region transcription start site region 44753
Gm36600 4 150704548 to 150739130 34582 + lncRNA gene predicted gene, 36600
Dp(4D4Mit190-D4Mit51)1Aam 4 150704851 to 155046016 4341165 chromosomal duplication duplication, Chr 4, Alea A Mills 1
D4Mit190 4 150704851 to 150704994 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 190
Del(4D4Mit190-D4Mit51)2Aam 4 150704851 to 155046016 4341165 chromosomal deletion deletion, Chr 4, Alea A Mills 2
Tssr40437 4 150705205 to 150705216 11 + TSS region transcription start site region 40437
Tssr40438 4 150710872 to 150710876 4 + TSS region transcription start site region 40438
Tssr44754 4 150717918 to 150717961 43 - TSS region transcription start site region 44754
Cpgi15356 4 150722218 to 150722401 183 CpG island CpG island 15356
Tssr40439 4 150748347 to 150748353 6 + TSS region transcription start site region 40439
Gm36806 4 150776226 to 150818152 41926 - lncRNA gene predicted gene, 36806
Tssr44755 4 150781418 to 150781422 4 - TSS region transcription start site region 44755
Tssr1385 4 150797955 to 150797957 2 - TSS region transcription start site region 1385
Tssr1386 4 150799591 to 150799611 20 - TSS region transcription start site region 1386
Gm42356 4 150807722 to 150809721 1999 + lncRNA gene predicted gene, 42356
Tssr40440 4 150807775 to 150807784 9 + TSS region transcription start site region 40440
Tssr40441 4 150807789 to 150807805 16 + TSS region transcription start site region 40441
Gm13049 4 150825733 to 150839575 13842 + lincRNA gene predicted gene 13049
1700045H11Rik 4 150828225 to 150854949 26724 - antisense lncRNA gene RIKEN cDNA 1700045H11 gene
Cpgi15357 4 150836503 to 150837149 646 CpG island CpG island 15357
Tssr40442 4 150847081 to 150847104 23 + TSS region transcription start site region 40442
Rps15a-ps3 4 150847113 to 150847507 394 + pseudogene ribosomal protein S15A, pseudogene 3
Tssr40443 4 150852722 to 150852730 8 + TSS region transcription start site region 40443
Tssr40444 4 150853769 to 150853788 19 + TSS region transcription start site region 40444
Tssr40445 4 150853795 to 150853812 17 + TSS region transcription start site region 40445
Errfi1 4 150853919 to 150868892 14973 + protein coding gene ERBB receptor feedback inhibitor 1
Tssr40446 4 150854016 to 150854050 34 + TSS region transcription start site region 40446
Tssr40447 4 150854053 to 150854063 10 + TSS region transcription start site region 40447
Cpgi15358 4 150854186 to 150855750 1564 CpG island CpG island 15358
Tssr40448 4 150854370 to 150854385 15 + TSS region transcription start site region 40448
Tssr44756 4 150854930 to 150854941 11 - TSS region transcription start site region 44756
Tssr40449 4 150855064 to 150855081 17 + TSS region transcription start site region 40449
Tssr40450 4 150865373 to 150865408 35 + TSS region transcription start site region 40450
Tssr40451 4 150866376 to 150866396 20 + TSS region transcription start site region 40451
Tssr40452 4 150866472 to 150866489 17 + TSS region transcription start site region 40452
Tssr40453 4 150866553 to 150866573 20 + TSS region transcription start site region 40453
Tssr40454 4 150866807 to 150866832 25 + TSS region transcription start site region 40454
Tssr44757 4 150866852 to 150866875 23 - TSS region transcription start site region 44757
Tssr40455 4 150866966 to 150866988 22 + TSS region transcription start site region 40455
Tssr40456 4 150867047 to 150867072 25 + TSS region transcription start site region 40456
Tssr40457 4 150867089 to 150867101 12 + TSS region transcription start site region 40457
Tssr40458 4 150867269 to 150867314 45 + TSS region transcription start site region 40458
Tssr40459 4 150868282 to 150868300 18 + TSS region transcription start site region 40459
Cpgi15359 4 150878976 to 150879313 337 CpG island CpG island 15359
Tssr44758 4 150879590 to 150879600 10 - TSS region transcription start site region 44758
Cpgi15360 4 150879838 to 150880196 358 CpG island CpG island 15360
Park7 4 150897133 to 150909921 12788 - protein coding gene Parkinson disease (autosomal recessive, early onset) 7
Tssr44759 4 150902073 to 150902086 13 - TSS region transcription start site region 44759
Tssr44760 4 150902091 to 150902098 7 - TSS region transcription start site region 44760
Tssr44761 4 150902100 to 150902119 19 - TSS region transcription start site region 44761
Tssr44762 4 150902127 to 150902147 20 - TSS region transcription start site region 44762
Tssr44763 4 150902155 to 150902180 25 - TSS region transcription start site region 44763
Tssr44764 4 150902190 to 150902198 8 - TSS region transcription start site region 44764
Tssr44765 4 150902224 to 150902246 22 - TSS region transcription start site region 44765
Tssr44766 4 150907205 to 150907247 42 - TSS region transcription start site region 44766
Tssr44767 4 150907323 to 150907330 7 - TSS region transcription start site region 44767
Tssr44768 4 150907361 to 150907375 14 - TSS region transcription start site region 44768
Tssr44769 4 150909428 to 150909459 31 - TSS region transcription start site region 44769
Cpgi15361 4 150909445 to 150910388 943 CpG island CpG island 15361
Tssr44770 4 150909780 to 150909791 11 - TSS region transcription start site region 44770
Tssr44771 4 150909812 to 150909884 72 - TSS region transcription start site region 44771
Tssr40460 4 150910041 to 150910091 50 + TSS region transcription start site region 40460
Cpgi15362 4 150913999 to 150914817 818 CpG island CpG island 15362
Tssr44772 4 150914401 to 150914480 79 - TSS region transcription start site region 44772
Tssr40461 4 150914584 to 150914601 17 + TSS region transcription start site region 40461
Tssr44773 4 150915183 to 150915191 8 - TSS region transcription start site region 44773
Tssr44774 4 150915281 to 150915290 9 - TSS region transcription start site region 44774