Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Lrdg2 | 4 | 21998075 | QTL | light induced retinal degeneration 2 | ||
Bcmd2 | 4 | 17277627 | QTL | B cell maturation defect 2 | ||
Athsq1 | 4 | 13679556 | QTL | atherosclerosis susceptibility QTL 1 | ||
Tssr40435 | 4 | 4 | + | TSS region | transcription start site region 40435 | |
Gm16079 | 4 | 10544 | - | lincRNA gene | predicted gene 16079 | |
D4Mit161.2 | 4 | 162 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 161.2 | ||
D4Mit161 | 4 | 143 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 161 | ||
Tssr40436 | 4 | 4 | + | TSS region | transcription start site region 40436 | |
Tssr44751 | 4 | 10 | - | TSS region | transcription start site region 44751 | |
Cpgi15355 | 4 | 348 | CpG island | CpG island 15355 | ||
Tssr44752 | 4 | 5 | - | TSS region | transcription start site region 44752 | |
Tssr44753 | 4 | 5 | - | TSS region | transcription start site region 44753 | |
Gm36600 | 4 | 34582 | + | lncRNA gene | predicted gene, 36600 | |
Del(4D4Mit190-D4Mit51)2Aam | 4 | 4341165 | chromosomal deletion | deletion, Chr 4, Alea A Mills 2 | ||
D4Mit190 | 4 | 143 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 190 | ||
Dp(4D4Mit190-D4Mit51)1Aam | 4 | 4341165 | chromosomal duplication | duplication, Chr 4, Alea A Mills 1 | ||
Tssr40437 | 4 | 11 | + | TSS region | transcription start site region 40437 | |
Tssr40438 | 4 | 4 | + | TSS region | transcription start site region 40438 | |
Tssr44754 | 4 | 43 | - | TSS region | transcription start site region 44754 | |
Cpgi15356 | 4 | 183 | CpG island | CpG island 15356 | ||
Tssr40439 | 4 | 6 | + | TSS region | transcription start site region 40439 | |
Gm36806 | 4 | 41926 | - | lncRNA gene | predicted gene, 36806 | |
Tssr44755 | 4 | 4 | - | TSS region | transcription start site region 44755 | |
Tssr1385 | 4 | 2 | - | TSS region | transcription start site region 1385 | |
Tssr1386 | 4 | 20 | - | TSS region | transcription start site region 1386 | |
Gm42356 | 4 | 1999 | + | lncRNA gene | predicted gene, 42356 | |
Tssr40440 | 4 | 9 | + | TSS region | transcription start site region 40440 | |
Tssr40441 | 4 | 16 | + | TSS region | transcription start site region 40441 | |
Gm13049 | 4 | 13842 | + | lincRNA gene | predicted gene 13049 | |
1700045H11Rik | 4 | 26724 | - | antisense lncRNA gene | RIKEN cDNA 1700045H11 gene | |
Cpgi15357 | 4 | 646 | CpG island | CpG island 15357 | ||
Tssr40442 | 4 | 23 | + | TSS region | transcription start site region 40442 | |
Rps15a-ps3 | 4 | 394 | + | pseudogene | ribosomal protein S15A, pseudogene 3 | |
Tssr40443 | 4 | 8 | + | TSS region | transcription start site region 40443 | |
Tssr40444 | 4 | 19 | + | TSS region | transcription start site region 40444 | |
Tssr40445 | 4 | 17 | + | TSS region | transcription start site region 40445 | |
Errfi1 | 4 | 14973 | + | protein coding gene | ERBB receptor feedback inhibitor 1 | |
Tssr40446 | 4 | 34 | + | TSS region | transcription start site region 40446 | |
Tssr40447 | 4 | 10 | + | TSS region | transcription start site region 40447 | |
Cpgi15358 | 4 | 1564 | CpG island | CpG island 15358 | ||
Tssr40448 | 4 | 15 | + | TSS region | transcription start site region 40448 | |
Tssr44756 | 4 | 11 | - | TSS region | transcription start site region 44756 | |
Tssr40449 | 4 | 17 | + | TSS region | transcription start site region 40449 | |
Tssr40450 | 4 | 35 | + | TSS region | transcription start site region 40450 | |
Tssr40451 | 4 | 20 | + | TSS region | transcription start site region 40451 | |
Tssr40452 | 4 | 17 | + | TSS region | transcription start site region 40452 | |
Tssr40453 | 4 | 20 | + | TSS region | transcription start site region 40453 | |
Tssr40454 | 4 | 25 | + | TSS region | transcription start site region 40454 | |
Tssr44757 | 4 | 23 | - | TSS region | transcription start site region 44757 | |
Tssr40455 | 4 | 22 | + | TSS region | transcription start site region 40455 | |
Tssr40456 | 4 | 25 | + | TSS region | transcription start site region 40456 | |
Tssr40457 | 4 | 12 | + | TSS region | transcription start site region 40457 | |
Tssr40458 | 4 | 45 | + | TSS region | transcription start site region 40458 | |
Tssr40459 | 4 | 18 | + | TSS region | transcription start site region 40459 | |
Cpgi15359 | 4 | 337 | CpG island | CpG island 15359 | ||
Tssr44758 | 4 | 10 | - | TSS region | transcription start site region 44758 | |
Cpgi15360 | 4 | 358 | CpG island | CpG island 15360 | ||
Park7 | 4 | 12788 | - | protein coding gene | Parkinson disease (autosomal recessive, early onset) 7 | |
Tssr44759 | 4 | 13 | - | TSS region | transcription start site region 44759 | |
Tssr44760 | 4 | 7 | - | TSS region | transcription start site region 44760 | |
Tssr44761 | 4 | 19 | - | TSS region | transcription start site region 44761 | |
Tssr44762 | 4 | 20 | - | TSS region | transcription start site region 44762 | |
Tssr44763 | 4 | 25 | - | TSS region | transcription start site region 44763 | |
Tssr44764 | 4 | 8 | - | TSS region | transcription start site region 44764 | |
Tssr44765 | 4 | 22 | - | TSS region | transcription start site region 44765 | |
Tssr44766 | 4 | 42 | - | TSS region | transcription start site region 44766 | |
Tssr44767 | 4 | 7 | - | TSS region | transcription start site region 44767 | |
Tssr44768 | 4 | 14 | - | TSS region | transcription start site region 44768 | |
Tssr44769 | 4 | 31 | - | TSS region | transcription start site region 44769 | |
Cpgi15361 | 4 | 943 | CpG island | CpG island 15361 | ||
Tssr44770 | 4 | 11 | - | TSS region | transcription start site region 44770 | |
Tssr44771 | 4 | 72 | - | TSS region | transcription start site region 44771 | |
Tssr40460 | 4 | 50 | + | TSS region | transcription start site region 40460 | |
Cpgi15362 | 4 | 818 | CpG island | CpG island 15362 | ||
Tssr44772 | 4 | 79 | - | TSS region | transcription start site region 44772 | |
Tssr40461 | 4 | 17 | + | TSS region | transcription start site region 40461 | |
Tssr44773 | 4 | 8 | - | TSS region | transcription start site region 44773 | |
Tssr44774 | 4 | 9 | - | TSS region | transcription start site region 44774 | |
Tssr40462 | 4 | 3 | + | TSS region | transcription start site region 40462 | |
Tssr40463 | 4 | 43 | + | TSS region | transcription start site region 40463 | |
Tnfrsf9 | 4 | 25949 | + | protein coding gene | tumor necrosis factor receptor superfamily, member 9 | |
Tssr40464 | 4 | 10 | + | TSS region | transcription start site region 40464 | |
Tssr40465 | 4 | 22 | + | TSS region | transcription start site region 40465 | |
Tssr40466 | 4 | 16 | + | TSS region | transcription start site region 40466 | |
Tssr40467 | 4 | 13 | + | TSS region | transcription start site region 40467 | |
Tssr40468 | 4 | 47 | + | TSS region | transcription start site region 40468 | |
Tssr40469 | 4 | 11 | + | TSS region | transcription start site region 40469 | |
Tssr40470 | 4 | 13 | + | TSS region | transcription start site region 40470 | |
Tssr44775 | 4 | 16 | - | TSS region | transcription start site region 44775 | |
Tssr44776 | 4 | 25 | - | TSS region | transcription start site region 44776 | |
Tssr44777 | 4 | 16 | - | TSS region | transcription start site region 44777 | |
Tssr40471 | 4 | 13 | + | TSS region | transcription start site region 40471 | |
Tssr40472 | 4 | 6 | + | TSS region | transcription start site region 40472 | |
D4Mit63 | 4 | 118 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 63 | ||
Gm23405 | 4 | 159 | + | snRNA gene | predicted gene, 23405 | |
Gm30120 | 4 | 15301 | - | lncRNA gene | predicted gene, 30120 | |
5330422M15Rik | 4 | 1320 | unclassified gene | RIKEN cDNA 5330422M15 gene | ||
Tssr40473 | 4 | 7 | + | TSS region | transcription start site region 40473 | |
Uts2 | 4 | 4713 | + | protein coding gene | urotensin 2 | |
Per3 | 4 | 41013 | - | protein coding gene | period circadian clock 3 | |
Tssr44778 | 4 | 4 | - | TSS region | transcription start site region 44778 | |
Cpgi15363 | 4 | 1017 | CpG island | CpG island 15363 | ||
Tssr44779 | 4 | 127 | - | TSS region | transcription start site region 44779 | |
Gm38529 | 4 | 14236 | + | protein coding gene | predicted gene, 38529 | |
Vamp3 | 4 | 10648 | - | protein coding gene | vesicle-associated membrane protein 3 | |
Cpgi15364 | 4 | 1154 | CpG island | CpG island 15364 | ||
Tssr1387 | 4 | 14 | + | TSS region | transcription start site region 1387 | |
Tssr44780 | 4 | 11 | - | TSS region | transcription start site region 44780 | |
Tssr44781 | 4 | 36 | - | TSS region | transcription start site region 44781 | |
Camta1 | 4 | 802245 | - | protein coding gene | calmodulin binding transcription activator 1 | |
Tssr44782 | 4 | 26 | - | TSS region | transcription start site region 44782 | |
Tssr44783 | 4 | 26 | - | TSS region | transcription start site region 44783 | |
Cpgi15365 | 4 | 320 | CpG island | CpG island 15365 | ||
Gm13090 | 4 | 1879 | + | protein coding gene | predicted gene 13090 | |
Gm46899 | 4 | 12371 | + | lncRNA gene | predicted gene, 46899 | |
Cpgi15366 | 4 | 1905 | CpG island | CpG island 15366 | ||
Tssr44784 | 4 | 33 | - | TSS region | transcription start site region 44784 | |
Tssr44785 | 4 | 92 | - | TSS region | transcription start site region 44785 | |
Tssr44786 | 4 | 4 | - | TSS region | transcription start site region 44786 | |
Cpgi15367 | 4 | 1236 | CpG island | CpG island 15367 | ||
Tssr44787 | 4 | 41 | - | TSS region | transcription start site region 44787 | |
Tssr44788 | 4 | 17 | - | TSS region | transcription start site region 44788 | |
Tssr44789 | 4 | 56 | - | TSS region | transcription start site region 44789 | |
Cpgi15368 | 4 | 182 | CpG island | CpG island 15368 | ||
Cpgi15369 | 4 | 1199 | CpG island | CpG island 15369 | ||
Tssr44790 | 4 | 11 | - | TSS region | transcription start site region 44790 | |
Tssr44791 | 4 | 7 | - | TSS region | transcription start site region 44791 | |
Gm30422 | 4 | 6311 | + | lncRNA gene | predicted gene, 30422 | |
Gm45960 | 4 | 11031 | + | lncRNA gene | predicted gene, 45960 | |
Cpgi15370 | 4 | 353 | CpG island | CpG island 15370 | ||
Cpgi15371 | 4 | 157 | CpG island | CpG island 15371 | ||
Tssr40474 | 4 | 53 | + | TSS region | transcription start site region 40474 | |
4930589P08Rik | 4 | 3112 | + | antisense lncRNA gene | RIKEN cDNA 4930589P08 gene | |
Tssr40475 | 4 | 10 | + | TSS region | transcription start site region 40475 | |
Tssr40476 | 4 | 18 | + | TSS region | transcription start site region 40476 | |
Gm30344 | 4 | 2592 | + | lncRNA gene | predicted gene, 30344 | |
Cpgi15372 | 4 | 154 | CpG island | CpG island 15372 | ||
D4Mit180 | 4 | 111 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 180 | ||
4930429L21Rik | 4 | 1164 | unclassified gene | RIKEN cDNA 4930429L21 gene | ||
Tssr44792 | 4 | 34 | - | TSS region | transcription start site region 44792 | |
Ap3q | 4 | 99 | QTL | alcohol preference 3 QTL | ||
D4Mit42 | 4 | 99 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 42 | ||
Scon2 | 4 | 99 | QTL | sucrose consumption 2 | ||
Bmd7 | 4 | -62506261 | QTL | bone mineral density 7 |