Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:150620789-150720932

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcmd2 4 133427367 to 150704994 17277627 QTL B cell maturation defect 2
Rere 4 150281646 to 150621966 340320 + protein coding gene arginine glutamic acid dipeptide (RE) repeats
Slc45a1 4 150629396 to 150652174 22778 - protein coding gene solute carrier family 45, member 1
Cpgi15353 4 150651860 to 150652283 423 CpG island CpG island 15353
Tssr44750 4 150652125 to 150652181 56 - TSS region transcription start site region 44750
Cpgi15354 4 150656015 to 150656254 239 CpG island CpG island 15354
Tssr40435 4 150661933 to 150661937 4 + TSS region transcription start site region 40435
Gm16079 4 150668248 to 150678792 10544 - lincRNA gene predicted gene 16079
D4Mit161.2 4 150670613 to 150670775 162 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 161.2
D4Mit161 4 150670789 to 150670932 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 161
Tssr40436 4 150678137 to 150678141 4 + TSS region transcription start site region 40436
Tssr44751 4 150678756 to 150678766 10 - TSS region transcription start site region 44751
Cpgi15355 4 150678825 to 150679173 348 CpG island CpG island 15355
Tssr44752 4 150686510 to 150686515 5 - TSS region transcription start site region 44752
Tssr44753 4 150687129 to 150687134 5 - TSS region transcription start site region 44753
Gm36600 4 150704548 to 150739130 34582 + lncRNA gene predicted gene, 36600
Dp(4D4Mit190-D4Mit51)1Aam 4 150704851 to 155046016 4341165 chromosomal duplication duplication, Chr 4, Alea A Mills 1
Del(4D4Mit190-D4Mit51)2Aam 4 150704851 to 155046016 4341165 chromosomal deletion deletion, Chr 4, Alea A Mills 2
D4Mit190 4 150704851 to 150704994 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 190
Tssr40437 4 150705205 to 150705216 11 + TSS region transcription start site region 40437
Tssr40438 4 150710872 to 150710876 4 + TSS region transcription start site region 40438
Tssr44754 4 150717918 to 150717961 43 - TSS region transcription start site region 44754