Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:150604548-150839130

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcmd2 4 133427367 to 150704994 17277627 QTL B cell maturation defect 2
Rere 4 150281646 to 150621966 340320 + protein coding gene arginine glutamic acid dipeptide (RE) repeats
Tssr40425 4 150613711 to 150613729 18 + TSS region transcription start site region 40425
Tssr40426 4 150613809 to 150613829 20 + TSS region transcription start site region 40426
Tssr40427 4 150614143 to 150614162 19 + TSS region transcription start site region 40427
Tssr40428 4 150614185 to 150614198 13 + TSS region transcription start site region 40428
Tssr40429 4 150614508 to 150614525 17 + TSS region transcription start site region 40429
Tssr40430 4 150614574 to 150614597 23 + TSS region transcription start site region 40430
Tssr40431 4 150615077 to 150615118 41 + TSS region transcription start site region 40431
Tssr40432 4 150615170 to 150615194 24 + TSS region transcription start site region 40432
Tssr40433 4 150615214 to 150615275 61 + TSS region transcription start site region 40433
Tssr40434 4 150615955 to 150615970 15 + TSS region transcription start site region 40434
Slc45a1 4 150629396 to 150652174 22778 - protein coding gene solute carrier family 45, member 1
Cpgi15353 4 150651860 to 150652283 423 CpG island CpG island 15353
Tssr44750 4 150652125 to 150652181 56 - TSS region transcription start site region 44750
Cpgi15354 4 150656015 to 150656254 239 CpG island CpG island 15354
Tssr40435 4 150661933 to 150661937 4 + TSS region transcription start site region 40435
Gm16079 4 150668248 to 150678792 10544 - lincRNA gene predicted gene 16079
D4Mit161.2 4 150670613 to 150670775 162 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 161.2
D4Mit161 4 150670789 to 150670932 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 161
Tssr40436 4 150678137 to 150678141 4 + TSS region transcription start site region 40436
Tssr44751 4 150678756 to 150678766 10 - TSS region transcription start site region 44751
Cpgi15355 4 150678825 to 150679173 348 CpG island CpG island 15355
Tssr44752 4 150686510 to 150686515 5 - TSS region transcription start site region 44752
Tssr44753 4 150687129 to 150687134 5 - TSS region transcription start site region 44753
Gm36600 4 150704548 to 150739130 34582 + lncRNA gene predicted gene, 36600
D4Mit190 4 150704851 to 150704994 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 190
Del(4D4Mit190-D4Mit51)2Aam 4 150704851 to 155046016 4341165 chromosomal deletion deletion, Chr 4, Alea A Mills 2
Dp(4D4Mit190-D4Mit51)1Aam 4 150704851 to 155046016 4341165 chromosomal duplication duplication, Chr 4, Alea A Mills 1
Tssr40437 4 150705205 to 150705216 11 + TSS region transcription start site region 40437
Tssr40438 4 150710872 to 150710876 4 + TSS region transcription start site region 40438
Tssr44754 4 150717918 to 150717961 43 - TSS region transcription start site region 44754
Cpgi15356 4 150722218 to 150722401 183 CpG island CpG island 15356
Tssr40439 4 150748347 to 150748353 6 + TSS region transcription start site region 40439
Gm36806 4 150776226 to 150818152 41926 - lncRNA gene predicted gene, 36806
Tssr44755 4 150781418 to 150781422 4 - TSS region transcription start site region 44755
Tssr1385 4 150797955 to 150797957 2 - TSS region transcription start site region 1385
Tssr1386 4 150799591 to 150799611 20 - TSS region transcription start site region 1386
Gm42356 4 150807722 to 150809721 1999 + lncRNA gene predicted gene, 42356
Tssr40440 4 150807775 to 150807784 9 + TSS region transcription start site region 40440
Tssr40441 4 150807789 to 150807805 16 + TSS region transcription start site region 40441
Gm13049 4 150825733 to 150839575 13842 + lincRNA gene predicted gene 13049
1700045H11Rik 4 150828225 to 150854949 26724 - antisense lncRNA gene RIKEN cDNA 1700045H11 gene
Cpgi15357 4 150836503 to 150837149 646 CpG island CpG island 15357