MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:150271935-150471956

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr40402	4	150279220 to 150279228	8	+	TSS region	transcription start site region 40402
Cpgi15350	4	150281030 to 150282397	1367		CpG island	CpG island 15350
Tssr40403	4	150281573 to 150281633	60	+	TSS region	transcription start site region 40403
Rere	4	150281646 to 150621966	340320	+	protein coding gene	arginine glutamic acid dipeptide (RE) repeats
Tssr40404	4	150282803 to 150282806	3	+	TSS region	transcription start site region 40404
Tssr40405	4	150286512 to 150286516	4	+	TSS region	transcription start site region 40405
Tssr40406	4	150294006 to 150294010	4	+	TSS region	transcription start site region 40406
Gm13092	4	150315177 to 150315436	259	-	pseudogene	predicted gene 13092
Tssr44740	4	150315518 to 150315561	43	-	TSS region	transcription start site region 44740
Gm23209	4	150321193 to 150321302	109	+	snRNA gene	predicted gene, 23209
D030004A10Rik	4	150328702 to 150334150	5448		unclassified gene	RIKEN cDNA D030004A10 gene
Cpgi15351	4	150371656 to 150372329	673		CpG island	CpG island 15351
Tssr40407	4	150371857 to 150371927	70	+	TSS region	transcription start site region 40407
Tssr40408	4	150371935 to 150371956	21	+	TSS region	transcription start site region 40408
Tssr40409	4	150372143 to 150372186	43	+	TSS region	transcription start site region 40409
Tssr40410	4	150406617 to 150406643	26	+	TSS region	transcription start site region 40410
E230012J19Rik	4	150416262 to 150418018	1756		unclassified gene	RIKEN cDNA E230012J19 gene
Tssr40411	4	150416920 to 150416925	5	+	TSS region	transcription start site region 40411