Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:150041512-150531516

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15344 4 150048099 to 150049321 1222 CpG island CpG island 15344
Tssr40363 4 150048191 to 150048244 53 + TSS region transcription start site region 40363
Tssr40364 4 150048278 to 150048292 14 + TSS region transcription start site region 40364
Gm13067 4 150049013 to 150056976 7963 + lincRNA gene predicted gene 13067
Tssr40365 4 150049173 to 150049191 18 + TSS region transcription start site region 40365
Tssr40366 4 150052630 to 150052633 3 + TSS region transcription start site region 40366
Tssr40367 4 150063544 to 150063558 14 + TSS region transcription start site region 40367
Tssr40368 4 150066131 to 150066144 13 + TSS region transcription start site region 40368
Mir34a 4 150068454 to 150068555 101 + miRNA gene microRNA 34a
Gm37795 4 150068539 to 150070997 2458 + unclassified gene predicted gene, 37795
Cpgi15345 4 150087093 to 150088501 1408 CpG island CpG island 15345
Gpr157 4 150087503 to 150105927 18424 + protein coding gene G protein-coupled receptor 157
Tssr40369 4 150087513 to 150087541 28 + TSS region transcription start site region 40369
Tssr40370 4 150087646 to 150087669 23 + TSS region transcription start site region 40370
Tssr40371 4 150103604 to 150103607 3 + TSS region transcription start site region 40371
Gm13093 4 150113879 to 150119263 5384 - lincRNA gene predicted gene 13093
Tssr40372 4 150119275 to 150119331 56 + TSS region transcription start site region 40372
Slc2a5 4 150119283 to 150144169 24886 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 5
Tssr40373 4 150119338 to 150119349 11 + TSS region transcription start site region 40373
Tssr40374 4 150120686 to 150120705 19 + TSS region transcription start site region 40374
D4Mit14 4 150130743 to 150130875 132 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 14
Cpgi15346 4 150132840 to 150133113 273 CpG island CpG island 15346
Tssr1384 4 150139328 to 150139343 15 + TSS region transcription start site region 1384
Tssr40375 4 150139513 to 150139520 7 + TSS region transcription start site region 40375
Tssr40376 4 150142283 to 150142288 5 + TSS region transcription start site region 40376
Tssr40377 4 150147509 to 150147520 11 + TSS region transcription start site region 40377
Tssr40378 4 150148881 to 150148896 15 + TSS region transcription start site region 40378
Tssr40379 4 150148905 to 150148916 11 + TSS region transcription start site region 40379
Slc2a7 4 150148972 to 150168482 19510 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 7
Cpgi15347 4 150158431 to 150158692 261 CpG island CpG island 15347
Car6 4 150187015 to 150201135 14120 - protein coding gene carbonic anhydrase 6
Tssr44720 4 150187390 to 150187397 7 - TSS region transcription start site region 44720
Tssr40380 4 150187416 to 150187419 3 + TSS region transcription start site region 40380
Tssr40381 4 150187425 to 150187441 16 + TSS region transcription start site region 40381
Tssr40382 4 150187443 to 150187450 7 + TSS region transcription start site region 40382
Tssr40383 4 150187457 to 150187468 11 + TSS region transcription start site region 40383
Tssr40384 4 150189143 to 150189174 31 + TSS region transcription start site region 40384
Tssr44721 4 150189151 to 150189157 6 - TSS region transcription start site region 44721
Tssr44722 4 150189185 to 150189190 5 - TSS region transcription start site region 44722
Tssr40385 4 150189198 to 150189205 7 + TSS region transcription start site region 40385
Tssr44723 4 150189235 to 150189245 10 - TSS region transcription start site region 44723
Tssr44724 4 150192511 to 150192516 5 - TSS region transcription start site region 44724
Tssr44725 4 150192538 to 150192558 20 - TSS region transcription start site region 44725
Tssr44726 4 150192573 to 150192585 12 - TSS region transcription start site region 44726
Tssr44727 4 150192629 to 150192633 4 - TSS region transcription start site region 44727
Tssr44728 4 150193758 to 150193775 17 - TSS region transcription start site region 44728
Tssr44729 4 150196079 to 150196086 7 - TSS region transcription start site region 44729
Tssr40386 4 150196094 to 150196095 1 + TSS region transcription start site region 40386
Tssr44730 4 150196109 to 150196117 8 - TSS region transcription start site region 44730
Tssr44731 4 150196142 to 150196155 13 - TSS region transcription start site region 44731
Tssr40387 4 150197310 to 150197322 12 + TSS region transcription start site region 40387
Tssr44732 4 150197355 to 150197360 5 - TSS region transcription start site region 44732
Tssr44733 4 150197362 to 150197385 23 - TSS region transcription start site region 44733
Tssr40388 4 150198091 to 150198138 47 + TSS region transcription start site region 40388
Tssr44734 4 150198133 to 150198140 7 - TSS region transcription start site region 44734
Tssr44735 4 150198177 to 150198199 22 - TSS region transcription start site region 44735
Tssr44736 4 150198219 to 150198230 11 - TSS region transcription start site region 44736
Tssr44737 4 150198469 to 150198497 28 - TSS region transcription start site region 44737
Tssr44738 4 150201125 to 150201141 16 - TSS region transcription start site region 44738
Tssr44739 4 150220701 to 150220721 20 - TSS region transcription start site region 44739
Gm13094 4 150228035 to 150228443 408 + pseudogene predicted gene 13094
Tssr40389 4 150231139 to 150231146 7 + TSS region transcription start site region 40389
Cpgi15348 4 150236461 to 150237800 1339 CpG island CpG island 15348
Tssr40390 4 150236685 to 150236767 82 + TSS region transcription start site region 40390
Eno1 4 150236726 to 150248873 12147 + protein coding gene enolase 1, alpha non-neuron
Tssr40391 4 150236770 to 150236780 10 + TSS region transcription start site region 40391
Tssr40392 4 150236789 to 150236796 7 + TSS region transcription start site region 40392
Tssr40393 4 150236802 to 150236809 7 + TSS region transcription start site region 40393
Tssr40394 4 150236816 to 150236819 3 + TSS region transcription start site region 40394
Tssr40395 4 150237202 to 150237208 6 + TSS region transcription start site region 40395
Tssr40396 4 150237211 to 150237239 28 + TSS region transcription start site region 40396
Tssr40397 4 150237303 to 150237342 39 + TSS region transcription start site region 40397
Tssr40398 4 150237694 to 150237705 11 + TSS region transcription start site region 40398
Tssr40399 4 150237723 to 150237737 14 + TSS region transcription start site region 40399
Tssr40400 4 150240920 to 150240924 4 + TSS region transcription start site region 40400
Tssr40401 4 150248589 to 150248597 8 + TSS region transcription start site region 40401
Gm33415 4 150259210 to 150262905 3695 + lncRNA gene predicted gene, 33415
Cpgi15349 4 150268958 to 150269301 343 CpG island CpG island 15349
Tssr40402 4 150279220 to 150279228 8 + TSS region transcription start site region 40402
Cpgi15350 4 150281030 to 150282397 1367 CpG island CpG island 15350
Tssr40403 4 150281573 to 150281633 60 + TSS region transcription start site region 40403
Rere 4 150281646 to 150621966 340320 + protein coding gene arginine glutamic acid dipeptide (RE) repeats
Tssr40404 4 150282803 to 150282806 3 + TSS region transcription start site region 40404
Tssr40405 4 150286512 to 150286516 4 + TSS region transcription start site region 40405
Tssr40406 4 150294006 to 150294010 4 + TSS region transcription start site region 40406
Gm13092 4 150315177 to 150315436 259 - pseudogene predicted gene 13092
Tssr44740 4 150315518 to 150315561 43 - TSS region transcription start site region 44740
Gm23209 4 150321193 to 150321302 109 + snRNA gene predicted gene, 23209
D030004A10Rik 4 150328702 to 150334150 5448 unclassified gene RIKEN cDNA D030004A10 gene
Cpgi15351 4 150371656 to 150372329 673 CpG island CpG island 15351
Tssr40407 4 150371857 to 150371927 70 + TSS region transcription start site region 40407
Tssr40408 4 150371935 to 150371956 21 + TSS region transcription start site region 40408
Tssr40409 4 150372143 to 150372186 43 + TSS region transcription start site region 40409
Tssr40410 4 150406617 to 150406643 26 + TSS region transcription start site region 40410
E230012J19Rik 4 150416262 to 150418018 1756 unclassified gene RIKEN cDNA E230012J19 gene
Tssr40411 4 150416920 to 150416925 5 + TSS region transcription start site region 40411
9430064G09Rik 4 150478018 to 150480170 2152 unclassified gene RIKEN cDNA 9430064G09 gene
Tssr40412 4 150488368 to 150488444 76 + TSS region transcription start site region 40412
Gm42355 4 150511945 to 150516396 4451 + protein coding gene predicted gene, 42355