Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:149953702-150709150

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190 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmb1 4 124371164 to 150592401 26221237 QTL lupus in MRL and B6 F2 cross, QTL 1
Bcmd2 4 133427367 to 150704994 17277627 QTL B cell maturation defect 2
Tb2r1 4 137946694 to 150592401 12645707 QTL TGF-beta2 responsiveness 1
Panc1 4 139622871 to 150009023 10386152 heritable phenotypic marker pancreas protein 1
Pphc2 4 139622871 to 150009023 10386152 heritable phenotypic marker polyunsaturated fat induced postprandial hypercholesterolemia
Spsb1 4 149896283 to 149955006 58723 - protein coding gene splA/ryanodine receptor domain and SOCS box containing 1
Cpgi15339 4 149954011 to 149955545 1534 CpG island CpG island 15339
Tssr44698 4 149954991 to 149955027 36 - TSS region transcription start site region 44698
Tssr44699 4 149955028 to 149955048 20 - TSS region transcription start site region 44699
Tssr44700 4 149955052 to 149955063 11 - TSS region transcription start site region 44700
Tssr44701 4 149974985 to 149974989 4 - TSS region transcription start site region 44701
Tssr44702 4 149976493 to 149976498 5 - TSS region transcription start site region 44702
Tssr44703 4 149976757 to 149976774 17 - TSS region transcription start site region 44703
H6pd 4 149979475 to 150009023 29548 - protein coding gene hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
Tssr44704 4 149980939 to 149980956 17 - TSS region transcription start site region 44704
Cpgi15340 4 149988910 to 149989211 301 CpG island CpG island 15340
Tssr44705 4 149995805 to 149995811 6 - TSS region transcription start site region 44705
Tssr44706 4 149996360 to 149996383 23 - TSS region transcription start site region 44706
Tssr44707 4 149996397 to 149996415 18 - TSS region transcription start site region 44707
Tssr44708 4 149996430 to 149996445 15 - TSS region transcription start site region 44708
Tssr44709 4 150000282 to 150000289 7 - TSS region transcription start site region 44709
Tssr44710 4 150001231 to 150001245 14 - TSS region transcription start site region 44710
Tssr44711 4 150001295 to 150001304 9 - TSS region transcription start site region 44711
Tssr44712 4 150001350 to 150001360 10 - TSS region transcription start site region 44712
Tssr44713 4 150001372 to 150001391 19 - TSS region transcription start site region 44713
Tssr44714 4 150001401 to 150001436 35 - TSS region transcription start site region 44714
Tssr44715 4 150003135 to 150003149 14 - TSS region transcription start site region 44715
Tssr44716 4 150003167 to 150003194 27 - TSS region transcription start site region 44716
Cpgi15341 4 150008365 to 150009471 1106 CpG island CpG island 15341
Tssr44717 4 150008977 to 150009086 109 - TSS region transcription start site region 44717
Tssr44718 4 150009530 to 150009548 18 - TSS region transcription start site region 44718
Tssr44719 4 150010989 to 150011000 11 - TSS region transcription start site region 44719
Tssr40361 4 150029839 to 150029850 11 + TSS region transcription start site region 40361
Cpgi15342 4 150030567 to 150030989 422 CpG island CpG island 15342
Cpgi15343 4 150033338 to 150033693 355 CpG island CpG island 15343
Tssr40362 4 150033558 to 150033565 7 + TSS region transcription start site region 40362
Cpgi15344 4 150048099 to 150049321 1222 CpG island CpG island 15344
Tssr40363 4 150048191 to 150048244 53 + TSS region transcription start site region 40363
Tssr40364 4 150048278 to 150048292 14 + TSS region transcription start site region 40364
Gm13067 4 150049013 to 150056976 7963 + lincRNA gene predicted gene 13067
Tssr40365 4 150049173 to 150049191 18 + TSS region transcription start site region 40365
Tssr40366 4 150052630 to 150052633 3 + TSS region transcription start site region 40366
Tssr40367 4 150063544 to 150063558 14 + TSS region transcription start site region 40367
Tssr40368 4 150066131 to 150066144 13 + TSS region transcription start site region 40368
Mir34a 4 150068454 to 150068555 101 + miRNA gene microRNA 34a
Gm37795 4 150068539 to 150070997 2458 + unclassified gene predicted gene, 37795
Cpgi15345 4 150087093 to 150088501 1408 CpG island CpG island 15345
Gpr157 4 150087503 to 150105927 18424 + protein coding gene G protein-coupled receptor 157
Tssr40369 4 150087513 to 150087541 28 + TSS region transcription start site region 40369
Tssr40370 4 150087646 to 150087669 23 + TSS region transcription start site region 40370
Tssr40371 4 150103604 to 150103607 3 + TSS region transcription start site region 40371
Gm13093 4 150113879 to 150119263 5384 - lincRNA gene predicted gene 13093
Tssr40372 4 150119275 to 150119331 56 + TSS region transcription start site region 40372
Slc2a5 4 150119283 to 150144169 24886 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 5
Tssr40373 4 150119338 to 150119349 11 + TSS region transcription start site region 40373
Tssr40374 4 150120686 to 150120705 19 + TSS region transcription start site region 40374
D4Mit14 4 150130743 to 150130875 132 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 14
Cpgi15346 4 150132840 to 150133113 273 CpG island CpG island 15346
Tssr1384 4 150139328 to 150139343 15 + TSS region transcription start site region 1384
Tssr40375 4 150139513 to 150139520 7 + TSS region transcription start site region 40375
Tssr40376 4 150142283 to 150142288 5 + TSS region transcription start site region 40376
Tssr40377 4 150147509 to 150147520 11 + TSS region transcription start site region 40377
Tssr40378 4 150148881 to 150148896 15 + TSS region transcription start site region 40378
Tssr40379 4 150148905 to 150148916 11 + TSS region transcription start site region 40379
Slc2a7 4 150148972 to 150168482 19510 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 7
Cpgi15347 4 150158431 to 150158692 261 CpG island CpG island 15347
Car6 4 150187015 to 150201135 14120 - protein coding gene carbonic anhydrase 6
Tssr44720 4 150187390 to 150187397 7 - TSS region transcription start site region 44720
Tssr40380 4 150187416 to 150187419 3 + TSS region transcription start site region 40380
Tssr40381 4 150187425 to 150187441 16 + TSS region transcription start site region 40381
Tssr40382 4 150187443 to 150187450 7 + TSS region transcription start site region 40382
Tssr40383 4 150187457 to 150187468 11 + TSS region transcription start site region 40383
Tssr40384 4 150189143 to 150189174 31 + TSS region transcription start site region 40384
Tssr44721 4 150189151 to 150189157 6 - TSS region transcription start site region 44721
Tssr44722 4 150189185 to 150189190 5 - TSS region transcription start site region 44722
Tssr40385 4 150189198 to 150189205 7 + TSS region transcription start site region 40385
Tssr44723 4 150189235 to 150189245 10 - TSS region transcription start site region 44723
Tssr44724 4 150192511 to 150192516 5 - TSS region transcription start site region 44724
Tssr44725 4 150192538 to 150192558 20 - TSS region transcription start site region 44725
Tssr44726 4 150192573 to 150192585 12 - TSS region transcription start site region 44726
Tssr44727 4 150192629 to 150192633 4 - TSS region transcription start site region 44727
Tssr44728 4 150193758 to 150193775 17 - TSS region transcription start site region 44728
Tssr44729 4 150196079 to 150196086 7 - TSS region transcription start site region 44729
Tssr40386 4 150196094 to 150196095 1 + TSS region transcription start site region 40386
Tssr44730 4 150196109 to 150196117 8 - TSS region transcription start site region 44730
Tssr44731 4 150196142 to 150196155 13 - TSS region transcription start site region 44731
Tssr40387 4 150197310 to 150197322 12 + TSS region transcription start site region 40387
Tssr44732 4 150197355 to 150197360 5 - TSS region transcription start site region 44732
Tssr44733 4 150197362 to 150197385 23 - TSS region transcription start site region 44733
Tssr40388 4 150198091 to 150198138 47 + TSS region transcription start site region 40388
Tssr44734 4 150198133 to 150198140 7 - TSS region transcription start site region 44734
Tssr44735 4 150198177 to 150198199 22 - TSS region transcription start site region 44735
Tssr44736 4 150198219 to 150198230 11 - TSS region transcription start site region 44736
Tssr44737 4 150198469 to 150198497 28 - TSS region transcription start site region 44737
Tssr44738 4 150201125 to 150201141 16 - TSS region transcription start site region 44738
Tssr44739 4 150220701 to 150220721 20 - TSS region transcription start site region 44739
Gm13094 4 150228035 to 150228443 408 + pseudogene predicted gene 13094
Tssr40389 4 150231139 to 150231146 7 + TSS region transcription start site region 40389
Cpgi15348 4 150236461 to 150237800 1339 CpG island CpG island 15348
Tssr40390 4 150236685 to 150236767 82 + TSS region transcription start site region 40390
Eno1 4 150236726 to 150248873 12147 + protein coding gene enolase 1, alpha non-neuron
Tssr40391 4 150236770 to 150236780 10 + TSS region transcription start site region 40391
Tssr40392 4 150236789 to 150236796 7 + TSS region transcription start site region 40392
Tssr40393 4 150236802 to 150236809 7 + TSS region transcription start site region 40393
Tssr40394 4 150236816 to 150236819 3 + TSS region transcription start site region 40394
Tssr40395 4 150237202 to 150237208 6 + TSS region transcription start site region 40395
Tssr40396 4 150237211 to 150237239 28 + TSS region transcription start site region 40396
Tssr40397 4 150237303 to 150237342 39 + TSS region transcription start site region 40397
Tssr40398 4 150237694 to 150237705 11 + TSS region transcription start site region 40398
Tssr40399 4 150237723 to 150237737 14 + TSS region transcription start site region 40399
Tssr40400 4 150240920 to 150240924 4 + TSS region transcription start site region 40400
Tssr40401 4 150248589 to 150248597 8 + TSS region transcription start site region 40401
Gm33415 4 150259210 to 150262905 3695 + lncRNA gene predicted gene, 33415
Cpgi15349 4 150268958 to 150269301 343 CpG island CpG island 15349
Tssr40402 4 150279220 to 150279228 8 + TSS region transcription start site region 40402
Cpgi15350 4 150281030 to 150282397 1367 CpG island CpG island 15350
Tssr40403 4 150281573 to 150281633 60 + TSS region transcription start site region 40403
Rere 4 150281646 to 150621966 340320 + protein coding gene arginine glutamic acid dipeptide (RE) repeats
Tssr40404 4 150282803 to 150282806 3 + TSS region transcription start site region 40404
Tssr40405 4 150286512 to 150286516 4 + TSS region transcription start site region 40405
Tssr40406 4 150294006 to 150294010 4 + TSS region transcription start site region 40406
Gm13092 4 150315177 to 150315436 259 - pseudogene predicted gene 13092
Tssr44740 4 150315518 to 150315561 43 - TSS region transcription start site region 44740
Gm23209 4 150321193 to 150321302 109 + snRNA gene predicted gene, 23209
D030004A10Rik 4 150328702 to 150334150 5448 unclassified gene RIKEN cDNA D030004A10 gene
Cpgi15351 4 150371656 to 150372329 673 CpG island CpG island 15351
Tssr40407 4 150371857 to 150371927 70 + TSS region transcription start site region 40407
Tssr40408 4 150371935 to 150371956 21 + TSS region transcription start site region 40408
Tssr40409 4 150372143 to 150372186 43 + TSS region transcription start site region 40409
Tssr40410 4 150406617 to 150406643 26 + TSS region transcription start site region 40410
E230012J19Rik 4 150416262 to 150418018 1756 unclassified gene RIKEN cDNA E230012J19 gene
Tssr40411 4 150416920 to 150416925 5 + TSS region transcription start site region 40411
9430064G09Rik 4 150478018 to 150480170 2152 unclassified gene RIKEN cDNA 9430064G09 gene
Tssr40412 4 150488368 to 150488444 76 + TSS region transcription start site region 40412
Gm42355 4 150511945 to 150516396 4451 + protein coding gene predicted gene, 42355
D4Mit1002 4 150536625 to 150536761 136 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 1002
Tssr44741 4 150544991 to 150545032 41 - TSS region transcription start site region 44741
Tssr40413 4 150548893 to 150548898 5 + TSS region transcription start site region 40413
Tssr44742 4 150556501 to 150556518 17 - TSS region transcription start site region 44742
Tssr40414 4 150563507 to 150563510 3 + TSS region transcription start site region 40414
Tssr40415 4 150566455 to 150566494 39 + TSS region transcription start site region 40415
Tssr40416 4 150566558 to 150566584 26 + TSS region transcription start site region 40416
Tssr44743 4 150566864 to 150566876 12 - TSS region transcription start site region 44743
Gm13091 4 150566869 to 150568544 1675 - antisense lncRNA gene predicted gene 13091
Tssr44744 4 150568700 to 150568733 33 - TSS region transcription start site region 44744
Tssr40417 4 150568816 to 150568835 19 + TSS region transcription start site region 40417
Cpgi15352 4 150569054 to 150570100 1046 CpG island CpG island 15352
Tssr40418 4 150569217 to 150569242 25 + TSS region transcription start site region 40418
Tssr40419 4 150569249 to 150569278 29 + TSS region transcription start site region 40419
Tssr40420 4 150569484 to 150569496 12 + TSS region transcription start site region 40420
Tssr40421 4 150569538 to 150569598 60 + TSS region transcription start site region 40421
Tssr44745 4 150569865 to 150569895 30 - TSS region transcription start site region 44745
Tssr44746 4 150570066 to 150570074 8 - TSS region transcription start site region 44746
Tssr44747 4 150570076 to 150570097 21 - TSS region transcription start site region 44747
Tssr44748 4 150570114 to 150570125 11 - TSS region transcription start site region 44748
Tssr40422 4 150570200 to 150570221 21 + TSS region transcription start site region 40422
Tssr44749 4 150570265 to 150570308 43 - TSS region transcription start site region 44749
Tssr40423 4 150571885 to 150571891 6 + TSS region transcription start site region 40423
Tssr40424 4 150573509 to 150573522 13 + TSS region transcription start site region 40424
D4Mit33 4 150592276 to 150592401 125 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 33
Ignpq2 4 150592276 to 150592401 125 QTL IgA nephropathy QTL 2
Sles2 4 150592401 to 95069342 -55523059 QTL systemic lupus erythmatosus suppressor 2
Tssr40425 4 150613711 to 150613729 18 + TSS region transcription start site region 40425
Tssr40426 4 150613809 to 150613829 20 + TSS region transcription start site region 40426
Tssr40427 4 150614143 to 150614162 19 + TSS region transcription start site region 40427
Tssr40428 4 150614185 to 150614198 13 + TSS region transcription start site region 40428
Tssr40429 4 150614508 to 150614525 17 + TSS region transcription start site region 40429
Tssr40430 4 150614574 to 150614597 23 + TSS region transcription start site region 40430
Tssr40431 4 150615077 to 150615118 41 + TSS region transcription start site region 40431
Tssr40432 4 150615170 to 150615194 24 + TSS region transcription start site region 40432
Tssr40433 4 150615214 to 150615275 61 + TSS region transcription start site region 40433
Tssr40434 4 150615955 to 150615970 15 + TSS region transcription start site region 40434
Slc45a1 4 150629396 to 150652174 22778 - protein coding gene solute carrier family 45, member 1
Cpgi15353 4 150651860 to 150652283 423 CpG island CpG island 15353
Tssr44750 4 150652125 to 150652181 56 - TSS region transcription start site region 44750
Cpgi15354 4 150656015 to 150656254 239 CpG island CpG island 15354
Tssr40435 4 150661933 to 150661937 4 + TSS region transcription start site region 40435
Gm16079 4 150668248 to 150678792 10544 - lincRNA gene predicted gene 16079
D4Mit161.2 4 150670613 to 150670775 162 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 161.2
D4Mit161 4 150670789 to 150670932 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 161
Tssr40436 4 150678137 to 150678141 4 + TSS region transcription start site region 40436
Tssr44751 4 150678756 to 150678766 10 - TSS region transcription start site region 44751
Cpgi15355 4 150678825 to 150679173 348 CpG island CpG island 15355
Tssr44752 4 150686510 to 150686515 5 - TSS region transcription start site region 44752
Tssr44753 4 150687129 to 150687134 5 - TSS region transcription start site region 44753
Gm36600 4 150704548 to 150739130 34582 + lncRNA gene predicted gene, 36600
D4Mit190 4 150704851 to 150704994 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 190
Del(4D4Mit190-D4Mit51)2Aam 4 150704851 to 155046016 4341165 chromosomal deletion deletion, Chr 4, Alea A Mills 2
Dp(4D4Mit190-D4Mit51)1Aam 4 150704851 to 155046016 4341165 chromosomal duplication duplication, Chr 4, Alea A Mills 1
Tssr40437 4 150705205 to 150705216 11 + TSS region transcription start site region 40437