Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:149908191-150188244

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Panc1 4 139622871 to 150009023 10386152 heritable phenotypic marker pancreas protein 1
Pphc2 4 139622871 to 150009023 10386152 heritable phenotypic marker polyunsaturated fat induced postprandial hypercholesterolemia
Spsb1 4 149896283 to 149955006 58723 - protein coding gene splA/ryanodine receptor domain and SOCS box containing 1
Tssr44694 4 149909570 to 149909575 5 - TSS region transcription start site region 44694
Tssr44695 4 149909583 to 149909612 29 - TSS region transcription start site region 44695
Tssr44696 4 149909680 to 149909694 14 - TSS region transcription start site region 44696
Tssr44697 4 149909719 to 149909744 25 - TSS region transcription start site region 44697
D4Mit127 4 149926037 to 149926199 162 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 127
Gasa2 4 149926037 to 149926199 162 QTL gastritis type A susceptibility locus 2
D4Nds5 4 149926042 to 149926195 153 DNA segment DNA segment, Chr 4, Nuffield Department of Surgery 5
Cpgi15339 4 149954011 to 149955545 1534 CpG island CpG island 15339
Tssr44698 4 149954991 to 149955027 36 - TSS region transcription start site region 44698
Tssr44699 4 149955028 to 149955048 20 - TSS region transcription start site region 44699
Tssr44700 4 149955052 to 149955063 11 - TSS region transcription start site region 44700
Tssr44701 4 149974985 to 149974989 4 - TSS region transcription start site region 44701
Tssr44702 4 149976493 to 149976498 5 - TSS region transcription start site region 44702
Tssr44703 4 149976757 to 149976774 17 - TSS region transcription start site region 44703
H6pd 4 149979475 to 150009023 29548 - protein coding gene hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
Tssr44704 4 149980939 to 149980956 17 - TSS region transcription start site region 44704
Cpgi15340 4 149988910 to 149989211 301 CpG island CpG island 15340
Tssr44705 4 149995805 to 149995811 6 - TSS region transcription start site region 44705
Tssr44706 4 149996360 to 149996383 23 - TSS region transcription start site region 44706
Tssr44707 4 149996397 to 149996415 18 - TSS region transcription start site region 44707
Tssr44708 4 149996430 to 149996445 15 - TSS region transcription start site region 44708
Tssr44709 4 150000282 to 150000289 7 - TSS region transcription start site region 44709
Tssr44710 4 150001231 to 150001245 14 - TSS region transcription start site region 44710
Tssr44711 4 150001295 to 150001304 9 - TSS region transcription start site region 44711
Tssr44712 4 150001350 to 150001360 10 - TSS region transcription start site region 44712
Tssr44713 4 150001372 to 150001391 19 - TSS region transcription start site region 44713
Tssr44714 4 150001401 to 150001436 35 - TSS region transcription start site region 44714
Tssr44715 4 150003135 to 150003149 14 - TSS region transcription start site region 44715
Tssr44716 4 150003167 to 150003194 27 - TSS region transcription start site region 44716
Cpgi15341 4 150008365 to 150009471 1106 CpG island CpG island 15341
Tssr44717 4 150008977 to 150009086 109 - TSS region transcription start site region 44717
Tssr44718 4 150009530 to 150009548 18 - TSS region transcription start site region 44718
Tssr44719 4 150010989 to 150011000 11 - TSS region transcription start site region 44719
Tssr40361 4 150029839 to 150029850 11 + TSS region transcription start site region 40361
Cpgi15342 4 150030567 to 150030989 422 CpG island CpG island 15342
Cpgi15343 4 150033338 to 150033693 355 CpG island CpG island 15343
Tssr40362 4 150033558 to 150033565 7 + TSS region transcription start site region 40362
Cpgi15344 4 150048099 to 150049321 1222 CpG island CpG island 15344
Tssr40363 4 150048191 to 150048244 53 + TSS region transcription start site region 40363
Tssr40364 4 150048278 to 150048292 14 + TSS region transcription start site region 40364
Gm13067 4 150049013 to 150056976 7963 + lincRNA gene predicted gene 13067
Tssr40365 4 150049173 to 150049191 18 + TSS region transcription start site region 40365
Tssr40366 4 150052630 to 150052633 3 + TSS region transcription start site region 40366
Tssr40367 4 150063544 to 150063558 14 + TSS region transcription start site region 40367
Tssr40368 4 150066131 to 150066144 13 + TSS region transcription start site region 40368
Mir34a 4 150068454 to 150068555 101 + miRNA gene microRNA 34a
Gm37795 4 150068539 to 150070997 2458 + unclassified gene predicted gene, 37795
Cpgi15345 4 150087093 to 150088501 1408 CpG island CpG island 15345
Gpr157 4 150087503 to 150105927 18424 + protein coding gene G protein-coupled receptor 157
Tssr40369 4 150087513 to 150087541 28 + TSS region transcription start site region 40369
Tssr40370 4 150087646 to 150087669 23 + TSS region transcription start site region 40370
Tssr40371 4 150103604 to 150103607 3 + TSS region transcription start site region 40371
Gm13093 4 150113879 to 150119263 5384 - lincRNA gene predicted gene 13093
Tssr40372 4 150119275 to 150119331 56 + TSS region transcription start site region 40372
Slc2a5 4 150119283 to 150144169 24886 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 5
Tssr40373 4 150119338 to 150119349 11 + TSS region transcription start site region 40373
Tssr40374 4 150120686 to 150120705 19 + TSS region transcription start site region 40374
D4Mit14 4 150130743 to 150130875 132 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 14
Cpgi15346 4 150132840 to 150133113 273 CpG island CpG island 15346
Tssr1384 4 150139328 to 150139343 15 + TSS region transcription start site region 1384
Tssr40375 4 150139513 to 150139520 7 + TSS region transcription start site region 40375
Tssr40376 4 150142283 to 150142288 5 + TSS region transcription start site region 40376
Tssr40377 4 150147509 to 150147520 11 + TSS region transcription start site region 40377
Tssr40378 4 150148881 to 150148896 15 + TSS region transcription start site region 40378
Tssr40379 4 150148905 to 150148916 11 + TSS region transcription start site region 40379
Slc2a7 4 150148972 to 150168482 19510 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 7
Cpgi15347 4 150158431 to 150158692 261 CpG island CpG island 15347
Car6 4 150187015 to 150201135 14120 - protein coding gene carbonic anhydrase 6
Tssr44720 4 150187390 to 150187397 7 - TSS region transcription start site region 44720
Tssr40380 4 150187416 to 150187419 3 + TSS region transcription start site region 40380
Tssr40381 4 150187425 to 150187441 16 + TSS region transcription start site region 40381
Tssr40382 4 150187443 to 150187450 7 + TSS region transcription start site region 40382
Tssr40383 4 150187457 to 150187468 11 + TSS region transcription start site region 40383