Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:149486420-149686427

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wld 4 149176319 to 149548252 371933 heritable phenotypic marker wallerian degeneration
Lzic 4 149485229 to 149496668 11439 + protein coding gene leucine zipper and CTNNBIP1 domain containing
Tssr40331 4 149496970 to 149496985 15 + TSS region transcription start site region 40331
Tssr40332 4 149497374 to 149497377 3 + TSS region transcription start site region 40332
Gm13071 4 149500633 to 149501008 375 + pseudogene predicted gene 13071
Tssr40333 4 149504637 to 149504677 40 + TSS region transcription start site region 40333
2900080M03Rik 4 149504662 to 149505240 578 unclassified gene RIKEN cDNA 2900080M03 gene
Gm24381 4 149517179 to 149517282 103 - snRNA gene predicted gene, 24381
Cpgi15328 4 149517882 to 149518970 1088 CpG island CpG island 15328
Tssr40334 4 149518127 to 149518157 30 + TSS region transcription start site region 40334
Tssr40335 4 149518195 to 149518209 14 + TSS region transcription start site region 40335
Tssr40336 4 149518216 to 149518277 61 + TSS region transcription start site region 40336
Ctnnbip1 4 149518241 to 149566437 48196 + protein coding gene catenin beta interacting protein 1
Tssr40337 4 149518288 to 149518308 20 + TSS region transcription start site region 40337
Mir5616 4 149537863 to 149537922 59 + miRNA gene microRNA 5616
Tssr40338 4 149539642 to 149539659 17 + TSS region transcription start site region 40338
Tssr40339 4 149539864 to 149539878 14 + TSS region transcription start site region 40339
Tssr40340 4 149545102 to 149545136 34 + TSS region transcription start site region 40340
D4Mit225.1 4 149547972 to 149548111 139 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 225.1
D4Mit225 4 149548103 to 149548252 149 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 225
Tssr40341 4 149553189 to 149553193 4 + TSS region transcription start site region 40341
Gm13066 4 149565620 to 149567790 2170 - antisense lncRNA gene predicted gene 13066
Tssr44662 4 149571290 to 149571324 34 - TSS region transcription start site region 44662
A930041D05Rik 4 149572732 to 149573992 1260 unclassified gene RIKEN cDNA A930041D05 gene
Cpgi15329 4 149585889 to 149588025 2136 CpG island CpG island 15329
Tssr40342 4 149586420 to 149586427 7 + TSS region transcription start site region 40342
Tssr40343 4 149586432 to 149586511 79 + TSS region transcription start site region 40343
Clstn1 4 149586468 to 149648899 62431 + protein coding gene calsyntenin 1
Tssr40344 4 149586514 to 149586548 34 + TSS region transcription start site region 40344
Tssr40345 4 149586555 to 149586566 11 + TSS region transcription start site region 40345
Tssr40346 4 149587243 to 149587274 31 + TSS region transcription start site region 40346
Tssr40347 4 149587282 to 149587296 14 + TSS region transcription start site region 40347
Tssr40348 4 149614116 to 149614133 17 + TSS region transcription start site region 40348
Tssr1381 4 149622760 to 149622788 28 + TSS region transcription start site region 1381
Tssr40349 4 149627284 to 149627296 12 + TSS region transcription start site region 40349
Tssr40350 4 149629324 to 149629351 27 + TSS region transcription start site region 40350
Tssr40351 4 149634691 to 149634711 20 + TSS region transcription start site region 40351
Tssr40352 4 149635240 to 149635252 12 + TSS region transcription start site region 40352
Tssr40353 4 149637400 to 149637404 4 + TSS region transcription start site region 40353
Tssr40354 4 149647881 to 149647913 32 + TSS region transcription start site region 40354
Tssr40355 4 149647953 to 149647956 3 + TSS region transcription start site region 40355
Pik3cd 4 149649168 to 149702566 53398 - protein coding gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
Mir7023 4 149655504 to 149655567 63 - miRNA gene microRNA 7023
Tssr44663 4 149657925 to 149657945 20 - TSS region transcription start site region 44663
Tssr44664 4 149663187 to 149663202 15 - TSS region transcription start site region 44664
Tssr44665 4 149664892 to 149664893 1 - TSS region transcription start site region 44665
Cpgi15330 4 149675339 to 149676405 1066 CpG island CpG island 15330
Tssr44666 4 149676043 to 149676065 22 - TSS region transcription start site region 44666
Tssr44667 4 149676066 to 149676124 58 - TSS region transcription start site region 44667
Tssr44668 4 149682983 to 149682985 2 - TSS region transcription start site region 44668
Tssr44669 4 149683143 to 149683146 3 - TSS region transcription start site region 44669
Tssr44670 4 149685697 to 149685701 4 - TSS region transcription start site region 44670