Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:148877016-149123006

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Casz1 4 148804429 to 148954889 150460 + protein coding gene castor zinc finger 1
Tssr40305 4 148889345 to 148889363 18 + TSS region transcription start site region 40305
Tssr40306 4 148889395 to 148889444 49 + TSS region transcription start site region 40306
Cpgi15313 4 148890921 to 148891540 619 CpG island CpG island 15313
Tssr40307 4 148895907 to 148895924 17 + TSS region transcription start site region 40307
Tssr40308 4 148896312 to 148896350 38 + TSS region transcription start site region 40308
Cpgi15314 4 148899784 to 148901925 2141 CpG island CpG island 15314
Tssr40309 4 148901128 to 148901202 74 + TSS region transcription start site region 40309
Tssr40310 4 148901301 to 148901311 10 + TSS region transcription start site region 40310
Gm15969 4 148913511 to 148914324 813 - antisense lncRNA gene predicted gene 15969
D4Mit129 4 148923159 to 148923287 128 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 129
Cpgi15315 4 148940718 to 148940879 161 CpG island CpG island 15315
Tssr40311 4 148941067 to 148941081 14 + TSS region transcription start site region 40311
Tssr40312 4 148941143 to 148941155 12 + TSS region transcription start site region 40312
Tssr40313 4 148941176 to 148941188 12 + TSS region transcription start site region 40313
Gm13205 4 148947492 to 148948914 1422 - antisense lncRNA gene predicted gene 13205
Tssr40314 4 148951127 to 148951140 13 + TSS region transcription start site region 40314
Cpgi15316 4 148951247 to 148953110 1863 CpG island CpG island 15316
Tssr44618 4 148952879 to 148952917 38 - TSS region transcription start site region 44618
Tssr44619 4 148952995 to 148953019 24 - TSS region transcription start site region 44619
Gm17029 4 148960297 to 148984671 24374 + antisense lncRNA gene predicted gene 17029
Tssr40315 4 148960354 to 148960365 11 + TSS region transcription start site region 40315
Pex14 4 148960535 to 149099812 139277 - protein coding gene peroxisomal biogenesis factor 14
Gm42351 4 148997016 to 149003006 5990 - lncRNA gene predicted gene, 42351
Cpgi15317 4 149081517 to 149081810 293 CpG island CpG island 15317
Gm9506 4 149096383 to 149096702 319 + pseudogene predicted gene 9506
Gm46722 4 149098924 to 149099819 895 + lncRNA gene predicted gene, 46722
Cpgi15318 4 149099274 to 149099992 718 CpG island CpG island 15318
Tssr44620 4 149099802 to 149099843 41 - TSS region transcription start site region 44620
Cpgi15319 4 149104007 to 149104626 619 CpG island CpG island 15319
Tssr40316 4 149104130 to 149104189 59 + TSS region transcription start site region 40316
Dffa 4 149104146 to 149120647 16501 + protein coding gene DNA fragmentation factor, alpha subunit
Tssr40317 4 149104201 to 149104231 30 + TSS region transcription start site region 40317
Tssr40318 4 149104236 to 149104247 11 + TSS region transcription start site region 40318
D4Mit189 4 149108596 to 149108722 126 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 189