Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:148588352-148858363

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfibq20 4 144973265 to 148822969 3849704 QTL liver fibrosis QTL 20
Tssr40283 4 148589919 to 148589939 20 + TSS region transcription start site region 40283
Cpgi15306 4 148591129 to 148592446 1317 CpG island CpG island 15306
Tssr40284 4 148591482 to 148591546 64 + TSS region transcription start site region 40284
Srm 4 148591513 to 148594619 3106 + protein coding gene spermidine synthase
Tssr40285 4 148591555 to 148591587 32 + TSS region transcription start site region 40285
Tssr40286 4 148591923 to 148591975 52 + TSS region transcription start site region 40286
Tssr40287 4 148591981 to 148591992 11 + TSS region transcription start site region 40287
Tssr40288 4 148592092 to 148592105 13 + TSS region transcription start site region 40288
Tssr40289 4 148593885 to 148593911 26 + TSS region transcription start site region 40289
Tssr40290 4 148593914 to 148593934 20 + TSS region transcription start site region 40290
Cpgi15307 4 148594080 to 148594283 203 CpG island CpG island 15307
Tssr40291 4 148594523 to 148594528 5 + TSS region transcription start site region 40291
Tssr44611 4 148599107 to 148599116 9 - TSS region transcription start site region 44611
Tssr40292 4 148601980 to 148601997 17 + TSS region transcription start site region 40292
Tssr40293 4 148602527 to 148602583 56 + TSS region transcription start site region 40293
Masp2 4 148602554 to 148615499 12945 + protein coding gene mannan-binding lectin serine peptidase 2
Tssr40294 4 148602658 to 148602660 2 + TSS region transcription start site region 40294
Tssr40295 4 148603755 to 148603762 7 + TSS region transcription start site region 40295
Tardbp 4 148612382 to 148626996 14614 - protein coding gene TAR DNA binding protein
Cpgi15308 4 148625747 to 148627212 1465 CpG island CpG island 15308
Tssr44612 4 148626731 to 148626746 15 - TSS region transcription start site region 44612
Tssr44613 4 148626756 to 148626775 19 - TSS region transcription start site region 44613
Tssr44614 4 148627009 to 148627033 24 - TSS region transcription start site region 44614
Gm572 4 148643317 to 148671572 28255 + protein coding gene predicted gene 572
Tssr40296 4 148664321 to 148664341 20 + TSS region transcription start site region 40296
Tssr40297 4 148664349 to 148664356 7 + TSS region transcription start site region 40297
Tssr40298 4 148667176 to 148667199 23 + TSS region transcription start site region 40298
Tssr40299 4 148667205 to 148667221 16 + TSS region transcription start site region 40299
Tssr40300 4 148667230 to 148667256 26 + TSS region transcription start site region 40300
D4Mit310 4 148696657 to 148696773 116 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 310
Gm13203 4 148713703 to 148716581 2878 + lincRNA gene predicted gene 13203
Tssr44615 4 148723352 to 148723363 11 - TSS region transcription start site region 44615
Cpgi15309 4 148723889 to 148724904 1015 CpG island CpG island 15309
Cpgi15310 4 148742474 to 148743579 1105 CpG island CpG island 15310
Tssr44616 4 148744228 to 148744242 14 - TSS region transcription start site region 44616
Gm32897 4 148744903 to 148747395 2492 - lncRNA gene predicted gene, 32897
Tssr44617 4 148751819 to 148751836 17 - TSS region transcription start site region 44617
Gm42350 4 148779750 to 148784880 5130 - lncRNA gene predicted gene, 42350
Cpgi15311 4 148803843 to 148807300 3457 CpG island CpG island 15311
Tssr1379 4 148804330 to 148804341 11 + TSS region transcription start site region 1379
Tssr40301 4 148804350 to 148804373 23 + TSS region transcription start site region 40301
Tssr40302 4 148804420 to 148804439 19 + TSS region transcription start site region 40302
Casz1 4 148804429 to 148954889 150460 + protein coding gene castor zinc finger 1
Tssr40303 4 148804450 to 148804494 44 + TSS region transcription start site region 40303
Tssr40304 4 148853536 to 148853538 2 + TSS region transcription start site region 40304