Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:145309065-146419098

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnfrsf8 4 145268976 to 145315147 46171 - protein coding gene tumor necrosis factor receptor superfamily, member 8
Cpgi15269 4 145314957 to 145315368 411 CpG island CpG island 15269
Tssr44544 4 145315143 to 145315169 26 - TSS region transcription start site region 44544
Gm13024 4 145391027 to 145391651 624 + pseudogene predicted gene 13024
Gm13224 4 145404306 to 145404399 93 + pseudogene predicted gene 13224
Platr16 4 145410245 to 145449756 39511 + unclassified non-coding RNA gene pluripotency associated transcript 16
Tssr40219 4 145410280 to 145410317 37 + TSS region transcription start site region 40219
Tssr40220 4 145432421 to 145432444 23 + TSS region transcription start site region 40220
Gm42346 4 145433410 to 145450774 17364 + pseudogene predicted gene, 42346
Tssr40221 4 145434683 to 145434729 46 + TSS region transcription start site region 40221
Gm13230 4 145446740 to 145450888 4148 + pseudogene predicted gene 13230
Gm13223 4 145455633 to 145456227 594 + pseudogene predicted gene 13223
Cpgi15270 4 145463623 to 145464283 660 CpG island CpG island 15270
Smarca5-ps 4 145464204 to 145467420 3216 + pseudogene SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene
Gm13229 4 145469711 to 145470050 339 - pseudogene predicted gene 13229
Zfp990 4 145510759 to 145538956 28197 + protein coding gene zinc finger protein 990
Gm21978 4 145560629 to 145560791 162 + pseudogene predicted gene 21978
Tssr40222 4 145564614 to 145564646 32 + TSS region transcription start site region 40222
Gm13228 4 145574528 to 145575161 633 + pseudogene predicted gene 13228
Gm13226 4 145576889 to 145577292 403 - pseudogene predicted gene 13226
Tssr44545 4 145577334 to 145577336 2 - TSS region transcription start site region 44545
Gm13222 4 145579036 to 145579173 137 + pseudogene predicted gene 13222
Tssr40223 4 145585140 to 145585158 18 + TSS region transcription start site region 40223
Gm13212 4 145585172 to 145625345 40173 + protein coding gene predicted gene 13212
Tssr40224 4 145585189 to 145585211 22 + TSS region transcription start site region 40224
Gm13234 4 145632504 to 145633250 746 + pseudogene predicted gene 13234
Cpgi15271 4 145640417 to 145640668 251 CpG island CpG island 15271
Gm13231 4 145641357 to 145644399 3042 + pseudogene predicted gene 13231
Gm13249 4 145646771 to 145647115 344 - pseudogene predicted gene 13249
Tssr40225 4 145670664 to 145670677 13 + TSS region transcription start site region 40225
Zfp980 4 145670697 to 145704437 33740 + protein coding gene zinc finger protein 980
Gm13239 4 145689855 to 145690442 587 + pseudogene predicted gene 13239
Gm26763 4 145700506 to 145712426 11920 - lincRNA gene predicted gene, 26763
Gm13232 4 145729581 to 145730212 631 - pseudogene predicted gene 13232
Gm13244 4 145745746 to 145747401 1655 + pseudogene predicted gene 13244
Gm13236 4 145762929 to 145764958 2029 + lincRNA gene predicted gene 13236
Gm13243 4 145774719 to 145775283 564 + pseudogene predicted gene 13243
Vmn2r-ps15 4 145775612 to 145775988 376 + pseudogene vomeronasal 2, receptor, pseudogene 15
Znf41-ps 4 145825237 to 145829942 4705 + pseudogene ZNF41, pseudogene
Cpgi15272 4 145837181 to 145837340 159 CpG island CpG island 15272
Gm13238 4 145837219 to 145837992 773 + pseudogene predicted gene 13238
Gm13246 4 145844404 to 145844718 314 - pseudogene predicted gene 13246
Tssr40226 4 145864065 to 145864098 33 + TSS region transcription start site region 40226
Zfp986 4 145868794 to 145899975 31181 + protein coding gene zinc finger protein 986
Gm13036 4 146058776 to 146059517 741 + pseudogene predicted gene 13036
Cpgi15274 4 146067008 to 146067932 924 CpG island CpG island 15274
Gm13034 4 146067524 to 146068718 1194 + pseudogene predicted gene 13034
Gm13035 4 146073257 to 146073598 341 - pseudogene predicted gene 13035
Zfp987 4 146097312 to 146126624 29312 + protein coding gene zinc finger protein 987
Tssr40227 4 146101614 to 146101638 24 + TSS region transcription start site region 40227
Gm26573 4 146153456 to 147024959 871503 - lincRNA gene predicted gene, 26573
Zfp600 4 146156827 to 146198756 41929 + protein coding gene zinc finger protein 600
Gm13165 4 146167522 to 146205732 38210 - antisense lncRNA gene predicted gene 13165
Gm13170 4 146178126 to 146178752 626 + pseudogene predicted gene 13170
Gm13167 4 146224036 to 146224613 577 - pseudogene predicted gene 13167
Gm13169 4 146239954 to 146241630 1676 + pseudogene predicted gene 13169
Gm13166 4 146251829 to 146278434 26605 + lincRNA gene predicted gene 13166
Gm13168 4 146263559 to 146264190 631 + pseudogene predicted gene 13168
Vmn2r-ps17 4 146264521 to 146264895 374 + pseudogene vomeronasal 2, receptor, pseudogene 17