Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:145075759-145973956

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145 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps13d 4 144972622 to 145195005 222383 - protein coding gene vacuolar protein sorting 13D
Tssr44478 4 145096826 to 145096837 11 - TSS region transcription start site region 44478
Tssr44479 4 145103770 to 145103784 14 - TSS region transcription start site region 44479
Tssr44480 4 145122330 to 145122334 4 - TSS region transcription start site region 44480
Gm42343 4 145145046 to 145150967 5921 + lncRNA gene predicted gene, 42343
Cpgi15267 4 145194324 to 145195341 1017 CpG island CpG island 15267
Tssr44481 4 145194953 to 145194964 11 - TSS region transcription start site region 44481
Tssr44482 4 145194967 to 145194993 26 - TSS region transcription start site region 44482
Tssr44483 4 145194999 to 145195044 45 - TSS region transcription start site region 44483
Tssr40192 4 145209919 to 145209930 11 + TSS region transcription start site region 40192
Tssr40193 4 145209971 to 145209980 9 + TSS region transcription start site region 40193
Tssr44484 4 145212773 to 145212785 12 - TSS region transcription start site region 44484
Tssr44485 4 145212827 to 145212851 24 - TSS region transcription start site region 44485
Tnfrsf1b 4 145213463 to 145246870 33407 - protein coding gene tumor necrosis factor receptor superfamily, member 1b
Tssr44486 4 145213656 to 145213673 17 - TSS region transcription start site region 44486
Tssr44487 4 145213710 to 145213728 18 - TSS region transcription start site region 44487
Tssr44488 4 145213813 to 145213845 32 - TSS region transcription start site region 44488
Tssr44489 4 145213905 to 145213921 16 - TSS region transcription start site region 44489
Tssr40194 4 145213929 to 145213970 41 + TSS region transcription start site region 40194
Tssr44490 4 145214198 to 145214217 19 - TSS region transcription start site region 44490
Tssr40195 4 145214281 to 145214299 18 + TSS region transcription start site region 40195
Tssr44491 4 145214365 to 145214395 30 - TSS region transcription start site region 44491
Tssr44492 4 145214590 to 145214611 21 - TSS region transcription start site region 44492
Tssr44493 4 145214751 to 145214764 13 - TSS region transcription start site region 44493
Tssr44494 4 145214985 to 145215008 23 - TSS region transcription start site region 44494
Tssr44495 4 145215046 to 145215062 16 - TSS region transcription start site region 44495
Tssr44496 4 145215115 to 145215133 18 - TSS region transcription start site region 44496
Tssr44497 4 145215238 to 145215251 13 - TSS region transcription start site region 44497
Tssr44498 4 145215363 to 145215395 32 - TSS region transcription start site region 44498
Tssr44499 4 145215406 to 145215440 34 - TSS region transcription start site region 44499
Tssr44500 4 145215494 to 145215526 32 - TSS region transcription start site region 44500
Tssr44501 4 145215554 to 145215569 15 - TSS region transcription start site region 44501
Tssr44502 4 145215650 to 145215667 17 - TSS region transcription start site region 44502
Tssr44503 4 145215766 to 145215779 13 - TSS region transcription start site region 44503
Tssr44504 4 145215832 to 145215845 13 - TSS region transcription start site region 44504
Tssr40196 4 145220639 to 145220640 1 + TSS region transcription start site region 40196
Tssr40197 4 145224341 to 145224406 65 + TSS region transcription start site region 40197
Tssr44505 4 145224386 to 145224497 111 - TSS region transcription start site region 44505
Tssr40198 4 145224847 to 145224874 27 + TSS region transcription start site region 40198
Tssr44506 4 145224850 to 145224866 16 - TSS region transcription start site region 44506
D4Mit233 4 145224944 to 145225118 174 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 233
Tssr44507 4 145225452 to 145225492 40 - TSS region transcription start site region 44507
Tssr44508 4 145225882 to 145225888 6 - TSS region transcription start site region 44508
Tssr44509 4 145227521 to 145227588 67 - TSS region transcription start site region 44509
Tssr44510 4 145229059 to 145229088 29 - TSS region transcription start site region 44510
Tssr40199 4 145234232 to 145234253 21 + TSS region transcription start site region 40199
Tssr44511 4 145234751 to 145234756 5 - TSS region transcription start site region 44511
Tssr44512 4 145234757 to 145234766 9 - TSS region transcription start site region 44512
Tssr44513 4 145234771 to 145234786 15 - TSS region transcription start site region 44513
Tssr44514 4 145234792 to 145234803 11 - TSS region transcription start site region 44514
Tssr44515 4 145234807 to 145234820 13 - TSS region transcription start site region 44515
Tssr44516 4 145234825 to 145234854 29 - TSS region transcription start site region 44516
Tssr44517 4 145234863 to 145234879 16 - TSS region transcription start site region 44517
Tssr44518 4 145234916 to 145234925 9 - TSS region transcription start site region 44518
Tssr44519 4 145234971 to 145234981 10 - TSS region transcription start site region 44519
Tssr44520 4 145235830 to 145235866 36 - TSS region transcription start site region 44520
Tssr40200 4 145236324 to 145236333 9 + TSS region transcription start site region 40200
Tssr40201 4 145236415 to 145236454 39 + TSS region transcription start site region 40201
Tssr44521 4 145236768 to 145236796 28 - TSS region transcription start site region 44521
Tssr44522 4 145237082 to 145237091 9 - TSS region transcription start site region 44522
Tssr44523 4 145238659 to 145238675 16 - TSS region transcription start site region 44523
Tssr44524 4 145240761 to 145240773 12 - TSS region transcription start site region 44524
Tssr44525 4 145240778 to 145240790 12 - TSS region transcription start site region 44525
Tssr40202 4 145241954 to 145241967 13 + TSS region transcription start site region 40202
Tssr44526 4 145244050 to 145244056 6 - TSS region transcription start site region 44526
Tssr44527 4 145245067 to 145245090 23 - TSS region transcription start site region 44527
Tssr44528 4 145245591 to 145245602 11 - TSS region transcription start site region 44528
Tssr44529 4 145245622 to 145245642 20 - TSS region transcription start site region 44529
Tssr44530 4 145245656 to 145245673 17 - TSS region transcription start site region 44530
Tssr40203 4 145245711 to 145245722 11 + TSS region transcription start site region 40203
Tssr44531 4 145245716 to 145245730 14 - TSS region transcription start site region 44531
Tssr40204 4 145245738 to 145245768 30 + TSS region transcription start site region 40204
Tssr40205 4 145245782 to 145245827 45 + TSS region transcription start site region 40205
Tssr40206 4 145245840 to 145245856 16 + TSS region transcription start site region 40206
Tssr44532 4 145246150 to 145246177 27 - TSS region transcription start site region 44532
Tssr44533 4 145246217 to 145246228 11 - TSS region transcription start site region 44533
Cpgi15268 4 145246378 to 145247063 685 CpG island CpG island 15268
Tssr1369 4 145246842 to 145246843 1 - TSS region transcription start site region 1369
Tssr44534 4 145246855 to 145246879 24 - TSS region transcription start site region 44534
Gm36233 4 145248555 to 145264971 16416 - lncRNA gene predicted gene, 36233
Tssr44535 4 145254436 to 145254460 24 - TSS region transcription start site region 44535
Tssr40207 4 145254730 to 145254779 49 + TSS region transcription start site region 40207
Tssr40208 4 145258443 to 145258451 8 + TSS region transcription start site region 40208
Tssr44536 4 145261405 to 145261419 14 - TSS region transcription start site region 44536
Tssr44537 4 145267594 to 145267618 24 - TSS region transcription start site region 44537
Tssr40209 4 145268037 to 145268059 22 + TSS region transcription start site region 40209
Tnfrsf8 4 145268976 to 145315147 46171 - protein coding gene tumor necrosis factor receptor superfamily, member 8
Tssr44538 4 145270156 to 145270167 11 - TSS region transcription start site region 44538
Tssr44539 4 145270171 to 145270185 14 - TSS region transcription start site region 44539
Tssr44540 4 145270246 to 145270265 19 - TSS region transcription start site region 44540
Tssr44541 4 145272809 to 145272836 27 - TSS region transcription start site region 44541
Tssr40210 4 145274082 to 145274091 9 + TSS region transcription start site region 40210
Tssr40211 4 145274120 to 145274140 20 + TSS region transcription start site region 40211
Tssr40212 4 145274147 to 145274162 15 + TSS region transcription start site region 40212
Tssr40213 4 145274168 to 145274179 11 + TSS region transcription start site region 40213
Tssr40214 4 145274186 to 145274202 16 + TSS region transcription start site region 40214
Tssr40215 4 145274215 to 145274230 15 + TSS region transcription start site region 40215
Tssr40216 4 145274639 to 145274643 4 + TSS region transcription start site region 40216
Tssr44542 4 145276672 to 145276688 16 - TSS region transcription start site region 44542
Tssr40217 4 145281521 to 145281558 37 + TSS region transcription start site region 40217
Tssr40218 4 145283714 to 145283759 45 + TSS region transcription start site region 40218
Tssr44543 4 145300774 to 145300777 3 - TSS region transcription start site region 44543
Cpgi15269 4 145314957 to 145315368 411 CpG island CpG island 15269
Tssr44544 4 145315143 to 145315169 26 - TSS region transcription start site region 44544
Gm13024 4 145391027 to 145391651 624 + pseudogene predicted gene 13024
Gm13224 4 145404306 to 145404399 93 + pseudogene predicted gene 13224
Platr16 4 145410245 to 145449756 39511 + unclassified non-coding RNA gene pluripotency associated transcript 16
Tssr40219 4 145410280 to 145410317 37 + TSS region transcription start site region 40219
Tssr40220 4 145432421 to 145432444 23 + TSS region transcription start site region 40220
Gm42346 4 145433410 to 145450774 17364 + pseudogene predicted gene, 42346
Tssr40221 4 145434683 to 145434729 46 + TSS region transcription start site region 40221
Gm13230 4 145446740 to 145450888 4148 + pseudogene predicted gene 13230
Gm13223 4 145455633 to 145456227 594 + pseudogene predicted gene 13223
Cpgi15270 4 145463623 to 145464283 660 CpG island CpG island 15270
Smarca5-ps 4 145464204 to 145467420 3216 + pseudogene SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene
Gm13229 4 145469711 to 145470050 339 - pseudogene predicted gene 13229
Zfp990 4 145510759 to 145538956 28197 + protein coding gene zinc finger protein 990
Gm21978 4 145560629 to 145560791 162 + pseudogene predicted gene 21978
Tssr40222 4 145564614 to 145564646 32 + TSS region transcription start site region 40222
Gm13228 4 145574528 to 145575161 633 + pseudogene predicted gene 13228
Gm13226 4 145576889 to 145577292 403 - pseudogene predicted gene 13226
Tssr44545 4 145577334 to 145577336 2 - TSS region transcription start site region 44545
Gm13222 4 145579036 to 145579173 137 + pseudogene predicted gene 13222
Tssr40223 4 145585140 to 145585158 18 + TSS region transcription start site region 40223
Gm13212 4 145585172 to 145625345 40173 + protein coding gene predicted gene 13212
Tssr40224 4 145585189 to 145585211 22 + TSS region transcription start site region 40224
Gm13234 4 145632504 to 145633250 746 + pseudogene predicted gene 13234
Cpgi15271 4 145640417 to 145640668 251 CpG island CpG island 15271
Gm13231 4 145641357 to 145644399 3042 + pseudogene predicted gene 13231
Gm13249 4 145646771 to 145647115 344 - pseudogene predicted gene 13249
Tssr40225 4 145670664 to 145670677 13 + TSS region transcription start site region 40225
Zfp980 4 145670697 to 145704437 33740 + protein coding gene zinc finger protein 980
Gm13239 4 145689855 to 145690442 587 + pseudogene predicted gene 13239
Gm26763 4 145700506 to 145712426 11920 - lincRNA gene predicted gene, 26763
Gm13232 4 145729581 to 145730212 631 - pseudogene predicted gene 13232
Gm13244 4 145745746 to 145747401 1655 + pseudogene predicted gene 13244
Gm13236 4 145762929 to 145764958 2029 + lincRNA gene predicted gene 13236
Gm13243 4 145774719 to 145775283 564 + pseudogene predicted gene 13243
Vmn2r-ps15 4 145775612 to 145775988 376 + pseudogene vomeronasal 2, receptor, pseudogene 15
Znf41-ps 4 145825237 to 145829942 4705 + pseudogene ZNF41, pseudogene
Cpgi15272 4 145837181 to 145837340 159 CpG island CpG island 15272
Gm13238 4 145837219 to 145837992 773 + pseudogene predicted gene 13238
Gm13246 4 145844404 to 145844718 314 - pseudogene predicted gene 13246
Tssr40226 4 145864065 to 145864098 33 + TSS region transcription start site region 40226
Zfp986 4 145868794 to 145899975 31181 + protein coding gene zinc finger protein 986