Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:144741396-145221433

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109 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm25938 4 144765627 to 144765792 165 - snRNA gene predicted gene, 25938
Gm438 4 144777204 to 144786583 9379 - protein coding gene predicted gene 438
Tssr44466 4 144786551 to 144786566 15 - TSS region transcription start site region 44466
Prdx2-ps2 4 144791837 to 144792660 823 + pseudogene peroxiredoxin 2, pseudogene 2
Gm46890 4 144811271 to 144812028 757 - pseudogene predicted gene, 46890
Gm46876 4 144855381 to 144898676 43295 - lncRNA gene predicted gene, 46876
Tssr40150 4 144891420 to 144891433 13 + TSS region transcription start site region 40150
Tssr40151 4 144891436 to 144891447 11 + TSS region transcription start site region 40151
Cpgi15264 4 144892071 to 144892881 810 CpG island CpG island 15264
Tssr44467 4 144892296 to 144892363 67 - TSS region transcription start site region 44467
Tssr44468 4 144892477 to 144892485 8 - TSS region transcription start site region 44468
Tssr40152 4 144892541 to 144892591 50 + TSS region transcription start site region 40152
Dhrs3 4 144892608 to 144927645 35037 + protein coding gene dehydrogenase/reductase (SDR family) member 3
Tssr40153 4 144892674 to 144892683 9 + TSS region transcription start site region 40153
Tssr40154 4 144892708 to 144892711 3 + TSS region transcription start site region 40154
Tssr40155 4 144892750 to 144892782 32 + TSS region transcription start site region 40155
Tssr40156 4 144892783 to 144892803 20 + TSS region transcription start site region 40156
Tssr40157 4 144892813 to 144892835 22 + TSS region transcription start site region 40157
Tssr40158 4 144892843 to 144892870 27 + TSS region transcription start site region 40158
Tssr40159 4 144892891 to 144892907 16 + TSS region transcription start site region 40159
Tssr40160 4 144893012 to 144893042 30 + TSS region transcription start site region 40160
Tssr40161 4 144893089 to 144893103 14 + TSS region transcription start site region 40161
Tssr40162 4 144893127 to 144893151 24 + TSS region transcription start site region 40162
Tssr40163 4 144893182 to 144893193 11 + TSS region transcription start site region 40163
Tssr40164 4 144893211 to 144893224 13 + TSS region transcription start site region 40164
Tssr40165 4 144893305 to 144893320 15 + TSS region transcription start site region 40165
Tssr40166 4 144893416 to 144893426 10 + TSS region transcription start site region 40166
Cpgi15265 4 144893465 to 144894147 682 CpG island CpG island 15265
Tssr40167 4 144893482 to 144893512 30 + TSS region transcription start site region 40167
Tssr40168 4 144893619 to 144893646 27 + TSS region transcription start site region 40168
Tssr40169 4 144893655 to 144893666 11 + TSS region transcription start site region 40169
Tssr40170 4 144893862 to 144893875 13 + TSS region transcription start site region 40170
Tssr40171 4 144895187 to 144895224 37 + TSS region transcription start site region 40171
Tssr1368 4 144895408 to 144895421 13 + TSS region transcription start site region 1368
Cpgi15266 4 144895543 to 144896243 700 CpG island CpG island 15266
Tssr40172 4 144895564 to 144895596 32 + TSS region transcription start site region 40172
Tssr40173 4 144898702 to 144898707 5 + TSS region transcription start site region 40173
Tssr44469 4 144903970 to 144903977 7 - TSS region transcription start site region 44469
Tssr40174 4 144904311 to 144904313 2 + TSS region transcription start site region 40174
Tssr40175 4 144906985 to 144907115 130 + TSS region transcription start site region 40175
Tssr40176 4 144912685 to 144912702 17 + TSS region transcription start site region 40176
Tssr40177 4 144919991 to 144920008 17 + TSS region transcription start site region 40177
Tssr40178 4 144920787 to 144920809 22 + TSS region transcription start site region 40178
Tssr40179 4 144921460 to 144921467 7 + TSS region transcription start site region 40179
Tssr40180 4 144922183 to 144922194 11 + TSS region transcription start site region 40180
Tssr40181 4 144923978 to 144923993 15 + TSS region transcription start site region 40181
Tssr40182 4 144927172 to 144927189 17 + TSS region transcription start site region 40182
Tssr40183 4 144927394 to 144927410 16 + TSS region transcription start site region 40183
Tssr40184 4 144927413 to 144927448 35 + TSS region transcription start site region 40184
Gm42344 4 144938570 to 144954151 15581 - lncRNA gene predicted gene, 42344
Gm38074 4 144957155 to 144958848 1693 - unclassified gene predicted gene, 38074
Gm36317 4 144963353 to 144965593 2240 + lncRNA gene predicted gene, 36317
Vps13d 4 144972622 to 145195005 222383 - protein coding gene vacuolar protein sorting 13D
Lfibq20 4 144973265 to 148822969 3849704 QTL liver fibrosis QTL 20
Tssr40185 4 144977441 to 144977453 12 + TSS region transcription start site region 40185
Tssr44470 4 144980792 to 144980827 35 - TSS region transcription start site region 44470
Tssr44471 4 144981265 to 144981279 14 - TSS region transcription start site region 44471
Tssr40186 4 144981396 to 144981433 37 + TSS region transcription start site region 40186
Tssr44472 4 144983454 to 144983472 18 - TSS region transcription start site region 44472
D4Ertd151e 4 144983606 to 144983805 199 DNA segment DNA segment, Chr 4, ERATO Doi 151, expressed
Tssr44473 4 144998327 to 144998343 16 - TSS region transcription start site region 44473
Tssr40187 4 145000436 to 145000442 6 + TSS region transcription start site region 40187
Tssr40188 4 145017948 to 145017966 18 + TSS region transcription start site region 40188
Tssr44474 4 145019509 to 145019516 7 - TSS region transcription start site region 44474
Tssr40189 4 145023032 to 145023047 15 + TSS region transcription start site region 40189
Tssr44475 4 145024742 to 145024746 4 - TSS region transcription start site region 44475
Tssr40190 4 145026856 to 145026899 43 + TSS region transcription start site region 40190
Tssr40191 4 145045887 to 145045894 7 + TSS region transcription start site region 40191
Tssr44476 4 145054247 to 145054259 12 - TSS region transcription start site region 44476
Gct5 4 145057656 to 145057773 117 QTL granulosa cell tumorigenesis 5
Gct1 4 145057656 to 145057773 117 QTL granulosa cell tumorigenesis 1
D4Mit232 4 145057656 to 145057773 117 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 232
D4Mit232.1 4 145057742 to 145057863 121 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 232.1
Tssr44477 4 145067220 to 145067229 9 - TSS region transcription start site region 44477
Tssr44478 4 145096826 to 145096837 11 - TSS region transcription start site region 44478
Tssr44479 4 145103770 to 145103784 14 - TSS region transcription start site region 44479
Tssr44480 4 145122330 to 145122334 4 - TSS region transcription start site region 44480
Gm42343 4 145145046 to 145150967 5921 + lncRNA gene predicted gene, 42343
Cpgi15267 4 145194324 to 145195341 1017 CpG island CpG island 15267
Tssr44481 4 145194953 to 145194964 11 - TSS region transcription start site region 44481
Tssr44482 4 145194967 to 145194993 26 - TSS region transcription start site region 44482
Tssr44483 4 145194999 to 145195044 45 - TSS region transcription start site region 44483
Tssr40192 4 145209919 to 145209930 11 + TSS region transcription start site region 40192
Tssr40193 4 145209971 to 145209980 9 + TSS region transcription start site region 40193
Tssr44484 4 145212773 to 145212785 12 - TSS region transcription start site region 44484
Tssr44485 4 145212827 to 145212851 24 - TSS region transcription start site region 44485
Tnfrsf1b 4 145213463 to 145246870 33407 - protein coding gene tumor necrosis factor receptor superfamily, member 1b
Tssr44486 4 145213656 to 145213673 17 - TSS region transcription start site region 44486
Tssr44487 4 145213710 to 145213728 18 - TSS region transcription start site region 44487
Tssr44488 4 145213813 to 145213845 32 - TSS region transcription start site region 44488
Tssr44489 4 145213905 to 145213921 16 - TSS region transcription start site region 44489
Tssr40194 4 145213929 to 145213970 41 + TSS region transcription start site region 40194
Tssr44490 4 145214198 to 145214217 19 - TSS region transcription start site region 44490
Tssr40195 4 145214281 to 145214299 18 + TSS region transcription start site region 40195
Tssr44491 4 145214365 to 145214395 30 - TSS region transcription start site region 44491
Tssr44492 4 145214590 to 145214611 21 - TSS region transcription start site region 44492
Tssr44493 4 145214751 to 145214764 13 - TSS region transcription start site region 44493
Tssr44494 4 145214985 to 145215008 23 - TSS region transcription start site region 44494
Tssr44495 4 145215046 to 145215062 16 - TSS region transcription start site region 44495
Tssr44496 4 145215115 to 145215133 18 - TSS region transcription start site region 44496
Tssr44497 4 145215238 to 145215251 13 - TSS region transcription start site region 44497
Tssr44498 4 145215363 to 145215395 32 - TSS region transcription start site region 44498
Tssr44499 4 145215406 to 145215440 34 - TSS region transcription start site region 44499
Tssr44500 4 145215494 to 145215526 32 - TSS region transcription start site region 44500
Tssr44501 4 145215554 to 145215569 15 - TSS region transcription start site region 44501
Tssr44502 4 145215650 to 145215667 17 - TSS region transcription start site region 44502
Tssr44503 4 145215766 to 145215779 13 - TSS region transcription start site region 44503
Tssr44504 4 145215832 to 145215845 13 - TSS region transcription start site region 44504
Tssr40196 4 145220639 to 145220640 1 + TSS region transcription start site region 40196