Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 4:144393707-144843398

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49 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Femd1 4 124100000 to 144600000 20500000 QTL femur midshaft diameter 1, 5 week
Pramel13 4 144391674 to 144408464 16790 - protein coding gene PRAME like 13
Tssr44454 4 144403621 to 144403640 19 - TSS region transcription start site region 44454
Tssr40137 4 144403745 to 144403750 5 + TSS region transcription start site region 40137
Pramel13os 4 144404868 to 144406301 1433 + antisense lncRNA gene PRAME like 13, opposite strand
Tssr44455 4 144408397 to 144408440 43 - TSS region transcription start site region 44455
1700012P22Rik 4 144418189 to 144438772 20583 - protein coding gene RIKEN cDNA 1700012P22 gene
D4Mit259 4 144435695 to 144435838 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 259
Tssr44456 4 144438714 to 144438717 3 - TSS region transcription start site region 44456
Tssr44457 4 144438762 to 144438763 1 - TSS region transcription start site region 44457
Tssr44458 4 144438766 to 144438807 41 - TSS region transcription start site region 44458
D4Mit160 4 144450107 to 144450302 195 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 160
Gm9944 4 144451220 to 144453641 2421 - lncRNA gene predicted gene 9944
Aadacl3 4 144453771 to 144463756 9985 - protein coding gene arylacetamide deacetylase like 3
Tssr44459 4 144463776 to 144463788 12 - TSS region transcription start site region 44459
Gm52990 4 144493880 to 144508323 14443 + pseudogene predicted gene, 52990
Gm13118 4 144498400 to 144498948 548 - pseudogene predicted gene 13118
Tssr40138 4 144519814 to 144519835 21 + TSS region transcription start site region 40138
Aadacl4fm1 4 144519822 to 144529353 9531 + protein coding gene AADACL4 family member 1
Tssr40139 4 144520223 to 144520233 10 + TSS region transcription start site region 40139
Tssr40140 4 144522229 to 144522247 18 + TSS region transcription start site region 40140
Tssr40141 4 144523630 to 144523654 24 + TSS region transcription start site region 40141
Gm13121 4 144526414 to 144527042 628 - pseudogene predicted gene 13121
Tssr40142 4 144529225 to 144529232 7 + TSS region transcription start site region 40142
Tssr40143 4 144529261 to 144529268 7 + TSS region transcription start site region 40143
Tssr40144 4 144529408 to 144529423 15 + TSS region transcription start site region 40144
Tssr40145 4 144529515 to 144529521 6 + TSS region transcription start site region 40145
Tssr40146 4 144529537 to 144529563 26 + TSS region transcription start site region 40146
Gm13126 4 144545506 to 144548568 3062 - pseudogene predicted gene 13126
Aadacl4fm2 4 144555000 to 144565134 10134 - protein coding gene AADACL4 family member 2
Tssr44460 4 144565193 to 144565201 8 - TSS region transcription start site region 44460
Tssr44461 4 144565267 to 144565274 7 - TSS region transcription start site region 44461
Gm13127 4 144587244 to 144588632 1388 + pseudogene predicted gene 13127
Cpgi15263 4 144588126 to 144588557 431 CpG island CpG island 15263
Tssr40147 4 144613640 to 144613653 13 + TSS region transcription start site region 40147
Tssr40148 4 144613667 to 144613683 16 + TSS region transcription start site region 40148
Tssr40149 4 144613697 to 144613704 7 + TSS region transcription start site region 40149
Aadacl4 4 144613707 to 144623398 9691 + protein coding gene arylacetamide deacetylase like 4
Aadacl4fm4 4 144669937 to 144686368 16431 - protein coding gene AADACL4 family member 4
Tssr44462 4 144686409 to 144686422 13 - TSS region transcription start site region 44462
AAdacl4fm3 4 144703191 to 144721404 18213 - protein coding gene AADACL4 family member 3
Tssr44463 4 144721431 to 144721439 8 - TSS region transcription start site region 44463
Tssr44464 4 144721453 to 144721467 14 - TSS region transcription start site region 44464
Tssr44465 4 144721471 to 144721497 26 - TSS region transcription start site region 44465
Gm25938 4 144765627 to 144765792 165 - snRNA gene predicted gene, 25938
Aadacl4fm5 4 144777204 to 144786583 9379 - protein coding gene AADACL4 family member 5
Tssr44466 4 144786551 to 144786566 15 - TSS region transcription start site region 44466
Prdx2-ps2 4 144791837 to 144792660 823 + pseudogene peroxiredoxin 2, pseudogene 2
Gm46890 4 144811271 to 144812028 757 - pseudogene predicted gene, 46890