Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:143877556-144442651

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pramef6 4 143894237 to 143900380 6143 - protein coding gene PRAME family member 6
Gm13100 4 143913857 to 143916442 2585 + pseudogene predicted gene 13100
Gm13106 4 143928534 to 143930736 2202 - pseudogene predicted gene 13106
Pramef25 4 143948580 to 143951016 2436 - protein coding gene PRAME family member 25
Gm13101 4 143964518 to 143966950 2432 - protein coding gene predicted gene 13101
Pramef17 4 143991127 to 143994369 3242 - protein coding gene PRAME family member 17
Gm13108 4 144033713 to 144035583 1870 + pseudogene predicted gene 13108
Gm13104 4 144041033 to 144042478 1445 - pseudogene predicted gene 13104
Pramel4 4 144059126 to 144069324 10198 + protein coding gene preferentially expressed antigen in melanoma like 4
Gm42367 4 144087362 to 144090870 3508 + protein coding gene predicted gene, 42367
Gm13102 4 144106474 to 144110101 3627 + protein coding gene predicted gene 13102
Oog3 4 144157556 to 144162651 5095 - protein coding gene oogenesin 3
Tssr44453 4 144162646 to 144162651 5 - TSS region transcription start site region 44453
Oog2 4 144190719 to 144196934 6215 + protein coding gene oogenesin 2
C87977 4 144206762 to 144213017 6255 - protein coding gene expressed sequence C87977
Gm13123 4 144247777 to 144248268 491 + pseudogene predicted gene 13123
Gm21012 4 144255727 to 144257581 1854 - pseudogene predicted gene, 21012
Pramel5 4 144270633 to 144280466 9833 - protein coding gene preferentially expressed antigen in melanoma like 5
Gm13120 4 144296692 to 144298137 1445 + pseudogene predicted gene 13120
Gm13130 4 144302992 to 144304859 1867 - pseudogene predicted gene 13130
Gm13128 4 144330249 to 144333465 3216 + protein coding gene predicted gene 13128
Gm13122 4 144345597 to 144346049 452 - pseudogene predicted gene 13122
Gm13119 4 144357964 to 144364419 6455 + protein coding gene predicted gene 13119
Pramef20 4 144372760 to 144377933 5173 - protein coding gene PRAME family member 20
Pramef12 4 144391674 to 144408464 16790 - protein coding gene PRAME family member 12
Tssr44454 4 144403621 to 144403640 19 - TSS region transcription start site region 44454
Tssr40137 4 144403745 to 144403750 5 + TSS region transcription start site region 40137
Pramef12os 4 144404868 to 144406301 1433 + antisense lncRNA gene PRAME family member 12, opposite strand
Tssr44455 4 144408397 to 144408440 43 - TSS region transcription start site region 44455
1700012P22Rik 4 144418189 to 144438772 20583 - protein coding gene RIKEN cDNA 1700012P22 gene
D4Mit259 4 144435695 to 144435838 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 259
Tssr44456 4 144438714 to 144438717 3 - TSS region transcription start site region 44456
Tssr44457 4 144438762 to 144438763 1 - TSS region transcription start site region 44457
Tssr44458 4 144438766 to 144438807 41 - TSS region transcription start site region 44458