Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:143423534-144435736

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D4Pot1 4 143428388 to 143428684 296 DNA segment DNA segment, Chr 4, Poetter 1
Oog4 4 143437164 to 143450308 13144 - protein coding gene oogenesin 4
Tssr1366 4 143450324 to 143450326 2 - TSS region transcription start site region 1366
Tssr44452 4 143457998 to 143458000 2 - TSS region transcription start site region 44452
Gm13042 4 143458378 to 143460538 2160 - pseudogene predicted gene 13042
Gm13046 4 143464274 to 143464774 500 - pseudogene predicted gene 13046
Gm13041 4 143499435 to 143502095 2660 + pseudogene predicted gene 13041
Gm13043 4 143511343 to 143517831 6488 + protein coding gene predicted gene 13043
Gm13040 4 143535954 to 143542471 6517 + protein coding gene predicted gene 13040
Gm13057 4 143551709 to 143558234 6525 + protein coding gene predicted gene 13057
BC080695 4 143567467 to 143573798 6331 + protein coding gene cDNA sequence BC080695
Gm13058 4 143595062 to 143597611 2549 - pseudogene predicted gene 13058
Gm13080 4 143611658 to 143612077 419 - pseudogene predicted gene 13080
Tssr1367 4 143612105 to 143612136 31 - TSS region transcription start site region 1367
Gm13083 4 143615003 to 143618595 3592 + protein coding gene predicted gene 13083
Gm13088 4 143653760 to 143657246 3486 - protein coding gene predicted gene 13088
Gm13085 4 143663143 to 143663787 644 - pseudogene predicted gene 13085
Gm13082 4 143671124 to 143671684 560 + pseudogene predicted gene 13082
Gm46861 4 143681880 to 143685298 3418 + pseudogene predicted gene, 46861
D4Mit353 4 143689173 to 143689290 117 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 353
Gm13089 4 143696500 to 143702711 6211 - protein coding gene predicted gene 13089
Tssr40136 4 143719449 to 143719452 3 + TSS region transcription start site region 40136
Gm13078 4 143719455 to 143729158 9703 + protein coding gene predicted gene 13078
Gm13087 4 143735298 to 143735553 255 - pseudogene predicted gene 13087
Gm13081 4 143745787 to 143751385 5598 + pseudogene predicted gene 13081
Gm13023 4 143789352 to 143795575 6223 + protein coding gene predicted gene 13023
Gm13084 4 143809245 to 143816093 6848 - protein coding gene predicted gene 13084
Gm13103 4 143846497 to 143853637 7140 + protein coding gene predicted gene 13103
Pramef6 4 143894237 to 143900380 6143 - protein coding gene PRAME family member 6
Gm13100 4 143913857 to 143916442 2585 + pseudogene predicted gene 13100
Gm13106 4 143928534 to 143930736 2202 - pseudogene predicted gene 13106
Pramef25 4 143948580 to 143951016 2436 - protein coding gene PRAME family member 25
Gm13101 4 143964518 to 143966950 2432 - protein coding gene predicted gene 13101
Pramef17 4 143991127 to 143994369 3242 - protein coding gene PRAME family member 17
Gm13108 4 144033713 to 144035583 1870 + pseudogene predicted gene 13108
Gm13104 4 144041033 to 144042478 1445 - pseudogene predicted gene 13104
Pramel4 4 144059126 to 144069324 10198 + protein coding gene preferentially expressed antigen in melanoma like 4
Gm42367 4 144087362 to 144090870 3508 + protein coding gene predicted gene, 42367
Gm13102 4 144106474 to 144110101 3627 + protein coding gene predicted gene 13102
Oog3 4 144157556 to 144162651 5095 - protein coding gene oogenesin 3
Tssr44453 4 144162646 to 144162651 5 - TSS region transcription start site region 44453
Oog2 4 144190719 to 144196934 6215 + protein coding gene oogenesin 2
C87977 4 144206762 to 144213017 6255 - protein coding gene expressed sequence C87977
Gm13123 4 144247777 to 144248268 491 + pseudogene predicted gene 13123
Gm21012 4 144255727 to 144257581 1854 - pseudogene predicted gene, 21012
Pramel5 4 144270633 to 144280466 9833 - protein coding gene preferentially expressed antigen in melanoma like 5
Gm13120 4 144296692 to 144298137 1445 + pseudogene predicted gene 13120
Gm13130 4 144302992 to 144304859 1867 - pseudogene predicted gene 13130
Gm13128 4 144330249 to 144333465 3216 + protein coding gene predicted gene 13128
Gm13122 4 144345597 to 144346049 452 - pseudogene predicted gene 13122
Gm13119 4 144357964 to 144364419 6455 + protein coding gene predicted gene 13119
Pramef20 4 144372760 to 144377933 5173 - protein coding gene PRAME family member 20
Pramef12 4 144391674 to 144408464 16790 - protein coding gene PRAME family member 12
Tssr44454 4 144403621 to 144403640 19 - TSS region transcription start site region 44454
Tssr40137 4 144403745 to 144403750 5 + TSS region transcription start site region 40137
Pramef12os 4 144404868 to 144406301 1433 + antisense lncRNA gene PRAME family member 12, opposite strand
Tssr44455 4 144408397 to 144408440 43 - TSS region transcription start site region 44455
1700012P22Rik 4 144418189 to 144438772 20583 - protein coding gene RIKEN cDNA 1700012P22 gene
D4Mit259 4 144435695 to 144435838 143 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 259