Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:143277426-143556091

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdpn 4 143267431 to 143299564 32133 - protein coding gene podoplanin
Tssr44446 4 143278898 to 143278915 17 - TSS region transcription start site region 44446
Tssr44447 4 143299275 to 143299290 15 - TSS region transcription start site region 44447
Tssr44448 4 143299465 to 143299482 17 - TSS region transcription start site region 44448
Tssr44449 4 143299498 to 143299511 13 - TSS region transcription start site region 44449
Gm26313 4 143340399 to 143340706 307 + unclassified non-coding RNA gene predicted gene, 26313
Cpgi15259 4 143349496 to 143350961 1465 CpG island CpG island 15259
Lrrc38 4 143349757 to 143371032 21275 + protein coding gene leucine rich repeat containing 38
Tssr40128 4 143349808 to 143349834 26 + TSS region transcription start site region 40128
Tssr40129 4 143350027 to 143350039 12 + TSS region transcription start site region 40129
Cpgi15260 4 143389089 to 143389551 462 CpG island CpG island 15260
Anp32b-ps1 4 143389659 to 143390416 757 + pseudogene Bacidic (leucine-rich) nuclear phosphoprotein 32 family, member B, pseudogene 1
Tssr40130 4 143389685 to 143389712 27 + TSS region transcription start site region 40130
Tssr40131 4 143390140 to 143390155 15 + TSS region transcription start site region 40131
Tssr44450 4 143390175 to 143390198 23 - TSS region transcription start site region 44450
Tssr44451 4 143390353 to 143390387 34 - TSS region transcription start site region 44451
Cpgi15261 4 143394262 to 143394829 567 CpG island CpG island 15261
Tssr40132 4 143394410 to 143394416 6 + TSS region transcription start site region 40132
Pramel1 4 143394428 to 143400160 5732 + protein coding gene preferentially expressed antigen in melanoma-like 1
Gm13045 4 143402344 to 143403413 1069 + pseudogene predicted gene 13045
Cpgi15262 4 143412383 to 143412896 513 CpG island CpG island 15262
Pramef8 4 143412426 to 143421091 8665 + protein coding gene PRAME family member 8
Tssr40133 4 143412920 to 143412983 63 + TSS region transcription start site region 40133
Tssr40134 4 143413002 to 143413014 12 + TSS region transcription start site region 40134
Tssr40135 4 143413764 to 143413770 6 + TSS region transcription start site region 40135
D4Pot1 4 143428388 to 143428684 296 DNA segment DNA segment, Chr 4, Poetter 1
Oog4 4 143437164 to 143450308 13144 - protein coding gene oogenesin 4
Tssr1366 4 143450324 to 143450326 2 - TSS region transcription start site region 1366
Tssr44452 4 143457998 to 143458000 2 - TSS region transcription start site region 44452
Gm13042 4 143458378 to 143460538 2160 - pseudogene predicted gene 13042
Gm13046 4 143464274 to 143464774 500 - pseudogene predicted gene 13046
Gm13041 4 143499435 to 143502095 2660 + pseudogene predicted gene 13041
Gm13043 4 143511343 to 143517831 6488 + protein coding gene predicted gene 13043
Gm13040 4 143535954 to 143542471 6517 + protein coding gene predicted gene 13040
Gm13057 4 143551709 to 143558234 6525 + protein coding gene predicted gene 13057