Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:142007390-142334401

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fhad1 4 141890438 to 142015082 124644 - protein coding gene forkhead-associated (FHA) phosphopeptide binding domain 1
Cpgi15250 4 142014751 to 142015379 628 CpG island CpG island 15250
Tssr44413 4 142015056 to 142015069 13 - TSS region transcription start site region 44413
Tssr44414 4 142015076 to 142015114 38 - TSS region transcription start site region 44414
4930455G09Rik 4 142017898 to 142028995 11097 + antisense lncRNA gene RIKEN cDNA 4930455G09 gene
Tssr40121 4 142017979 to 142017990 11 + TSS region transcription start site region 40121
Tssr40122 4 142018007 to 142018034 27 + TSS region transcription start site region 40122
Tmem51 4 142030992 to 142084304 53312 - protein coding gene transmembrane protein 51
Cpgi15251 4 142031361 to 142032121 760 CpG island CpG island 15251
Gm13053 4 142042912 to 142048578 5666 - sense intronic lncRNA gene predicted gene 13053
Tssr44415 4 142048458 to 142048468 10 - TSS region transcription start site region 44415
Tssr44416 4 142048531 to 142048540 9 - TSS region transcription start site region 44416
Tssr44417 4 142048569 to 142048584 15 - TSS region transcription start site region 44417
Tssr44418 4 142049005 to 142049012 7 - TSS region transcription start site region 44418
D4Mit128 4 142058983 to 142059132 149 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 128
D4Mit311 4 142062391 to 142062494 103 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 311
Tssr40123 4 142078278 to 142078290 12 + TSS region transcription start site region 40123
Cpgi15252 4 142083758 to 142084810 1052 CpG island CpG island 15252
Tssr44419 4 142084197 to 142084219 22 - TSS region transcription start site region 44419
Tssr44420 4 142084221 to 142084262 41 - TSS region transcription start site region 44420
Tmem51os1 4 142084298 to 142088101 3803 + antisense lncRNA gene Tmem51 opposite strand 1
Tssr44421 4 142084527 to 142084563 36 - TSS region transcription start site region 44421
Tssr44422 4 142084665 to 142084683 18 - TSS region transcription start site region 44422
Tssr40124 4 142089141 to 142089153 12 + TSS region transcription start site region 40124
Kazn 4 142102390 to 142239401 137011 - protein coding gene kazrin, periplakin interacting protein
Gm35581 4 142126678 to 142128190 1512 + lncRNA gene predicted gene, 35581
Tssr40125 4 142164616 to 142164656 40 + TSS region transcription start site region 40125
Tssr44423 4 142170998 to 142171038 40 - TSS region transcription start site region 44423
Gm13062 4 142180602 to 142184139 3537 + antisense lncRNA gene predicted gene 13062
Tssr44424 4 142192952 to 142192956 4 - TSS region transcription start site region 44424
Tssr40126 4 142238230 to 142238241 11 + TSS region transcription start site region 40126
Cpgi15253 4 142238336 to 142239736 1400 CpG island CpG island 15253
Gm35531 4 142239350 to 142242570 3220 + lncRNA gene predicted gene, 35531
Tssr44425 4 142239356 to 142239418 62 - TSS region transcription start site region 44425
Tssr44426 4 142239440 to 142239451 11 - TSS region transcription start site region 44426
1700085G17Rik 4 142255660 to 142256075 415 unclassified gene RIKEN cDNA 1700085G17 gene
Tssr40127 4 142307708 to 142307742 34 + TSS region transcription start site region 40127
Gm13052 4 142307765 to 142346475 38710 - lincRNA gene predicted gene 13052