Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:141676769-141816787

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pwgrq4 4 105978113 to 141706527 35728414 QTL pre-weaning growth rate QTL 4
Pwbwq8 4 105978113 to 141706527 35728414 QTL post-weaning body weight QTL 8
Pwbwq9 4 105978113 to 141706527 35728414 QTL post-weaning body weight QTL 9
Pwbwq4 4 105978113 to 141706527 35728414 QTL pre-weaning body weight QTL 4
Tssr44357 4 141679549 to 141679551 2 - TSS region transcription start site region 44357
Ddi2 4 141683563 to 141723419 39856 - protein coding gene DNA-damage inducible protein 2
Rsc1a1 4 141683851 to 141685599 1748 - protein coding gene regulatory solute carrier protein, family 1, member 1
Tssr44358 4 141696043 to 141696047 4 - TSS region transcription start site region 44358
Tssr44359 4 141708402 to 141708414 12 - TSS region transcription start site region 44359
Tssr40093 4 141714044 to 141714049 5 + TSS region transcription start site region 40093
Cpgi15241 4 141722732 to 141723927 1195 CpG island CpG island 15241
Tssr44360 4 141723297 to 141723308 11 - TSS region transcription start site region 44360
Tssr44361 4 141723401 to 141723436 35 - TSS region transcription start site region 44361
Tssr1364 4 141723439 to 141723454 15 - TSS region transcription start site region 1364
Tssr44362 4 141723458 to 141723466 8 - TSS region transcription start site region 44362
Gm34863 4 141729503 to 141743817 14314 + lncRNA gene predicted gene, 34863
Cpgi15242 4 141734916 to 141735267 351 CpG island CpG island 15242
Agmat 4 141746675 to 141759263 12588 + protein coding gene agmatine ureohydrolase (agmatinase)
Tssr40094 4 141746730 to 141746759 29 + TSS region transcription start site region 40094
Tssr40095 4 141746769 to 141746787 18 + TSS region transcription start site region 40095
Tssr40096 4 141746792 to 141746814 22 + TSS region transcription start site region 40096
Cpgi15243 4 141746870 to 141747160 290 CpG island CpG island 15243
Tssr40097 4 141750293 to 141750294 1 + TSS region transcription start site region 40097
Tssr40098 4 141757347 to 141757395 48 + TSS region transcription start site region 40098
Dnajc16 4 141761998 to 141790644 28646 - protein coding gene DnaJ heat shock protein family (Hsp40) member C16
Cpgi15244 4 141790063 to 141791116 1053 CpG island CpG island 15244
Tssr44363 4 141790629 to 141790698 69 - TSS region transcription start site region 44363
Tssr44364 4 141790899 to 141790941 42 - TSS region transcription start site region 44364
Cpgi15245 4 141793076 to 141794180 1104 CpG island CpG island 15245
Tssr44365 4 141793183 to 141793188 5 - TSS region transcription start site region 44365
Casp9 4 141793612 to 141815976 22364 + protein coding gene caspase 9
Tssr40099 4 141793705 to 141793735 30 + TSS region transcription start site region 40099
Tssr40100 4 141793789 to 141793809 20 + TSS region transcription start site region 40100
Tssr40101 4 141793818 to 141793848 30 + TSS region transcription start site region 40101
Tssr40102 4 141814957 to 141814971 14 + TSS region transcription start site region 40102
Cela2a 4 141814963 to 141826003 11040 - protein coding gene chymotrypsin-like elastase family, member 2A
Tssr40103 4 141814982 to 141814987 5 + TSS region transcription start site region 40103
Tssr44366 4 141814993 to 141815063 70 - TSS region transcription start site region 44366
Tssr40104 4 141814995 to 141815033 38 + TSS region transcription start site region 40104
Tssr44367 4 141815789 to 141815791 2 - TSS region transcription start site region 44367
Tssr44368 4 141816734 to 141816738 4 - TSS region transcription start site region 44368