Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Pwgrq4 | 4 | 35728414 | QTL | pre-weaning growth rate QTL 4 | ||
Pwbwq9 | 4 | 35728414 | QTL | post-weaning body weight QTL 9 | ||
Pwbwq8 | 4 | 35728414 | QTL | post-weaning body weight QTL 8 | ||
Pwbwq4 | 4 | 35728414 | QTL | pre-weaning body weight QTL 4 | ||
Shali2 | 4 | 17684181 | QTL | survival time to hyperoxic acute lung injury 2 | ||
Fblim1 | 4 | 29990 | - | protein coding gene | filamin binding LIM protein 1 | |
Tssr44336 | 4 | 20 | - | TSS region | transcription start site region 44336 | |
Tssr44337 | 4 | 15 | - | TSS region | transcription start site region 44337 | |
Cpgi15237 | 4 | 879 | CpG island | CpG island 15237 | ||
Tssr44338 | 4 | 38 | - | TSS region | transcription start site region 44338 | |
Tssr44339 | 4 | 11 | - | TSS region | transcription start site region 44339 | |
Tssr44340 | 4 | 15 | - | TSS region | transcription start site region 44340 | |
Tssr44341 | 4 | 51 | - | TSS region | transcription start site region 44341 | |
Tssr44342 | 4 | 7 | - | TSS region | transcription start site region 44342 | |
Tssr44343 | 4 | 62 | - | TSS region | transcription start site region 44343 | |
Tssr44344 | 4 | 32 | - | TSS region | transcription start site region 44344 | |
Tssr44345 | 4 | 47 | - | TSS region | transcription start site region 44345 | |
Tssr44346 | 4 | 9 | - | TSS region | transcription start site region 44346 | |
Tmem82 | 4 | 4404 | - | protein coding gene | transmembrane protein 82 | |
Tssr40087 | 4 | 2 | + | TSS region | transcription start site region 40087 | |
Tssr40088 | 4 | 49 | + | TSS region | transcription start site region 40088 | |
AI507597 | 4 | 1234 | + | antisense lncRNA gene | expressed sequence AI507597 | |
Tssr40089 | 4 | 9 | + | TSS region | transcription start site region 40089 | |
Cpgi15238 | 4 | 722 | CpG island | CpG island 15238 | ||
Tssr44347 | 4 | 60 | - | TSS region | transcription start site region 44347 | |
Slc25a34 | 4 | 4997 | - | protein coding gene | solute carrier family 25, member 34 | |
Tssr1363 | 4 | 5 | - | TSS region | transcription start site region 1363 | |
Tssr40090 | 4 | 9 | + | TSS region | transcription start site region 40090 | |
Tssr44348 | 4 | 41 | - | TSS region | transcription start site region 44348 | |
Plekhm2 | 4 | 38383 | - | protein coding gene | pleckstrin homology domain containing, family M (with RUN domain) member 2 | |
Cpgi15239 | 4 | 346 | CpG island | CpG island 15239 | ||
Tssr44349 | 4 | 17 | - | TSS region | transcription start site region 44349 | |
Tssr44350 | 4 | 33 | - | TSS region | transcription start site region 44350 | |
Tssr44351 | 4 | 11 | - | TSS region | transcription start site region 44351 | |
Tssr44352 | 4 | 5 | - | TSS region | transcription start site region 44352 | |
4930451G21Rik | 4 | 2796 | unclassified gene | RIKEN cDNA 4930451G21 gene | ||
Tssr44353 | 4 | 41 | - | TSS region | transcription start site region 44353 | |
Tssr44354 | 4 | 24 | - | TSS region | transcription start site region 44354 | |
Cpgi15240 | 4 | 1396 | CpG island | CpG island 15240 | ||
Tssr44355 | 4 | 22 | - | TSS region | transcription start site region 44355 | |
Tssr44356 | 4 | 107 | - | TSS region | transcription start site region 44356 | |
Tssr40091 | 4 | 44 | + | TSS region | transcription start site region 40091 | |
Tssr40092 | 4 | 8 | + | TSS region | transcription start site region 40092 | |
Tssr44357 | 4 | 2 | - | TSS region | transcription start site region 44357 | |
Ddi2 | 4 | 39856 | - | protein coding gene | DNA-damage inducible protein 2 | |
Rsc1a1 | 4 | 1748 | - | protein coding gene | regulatory solute carrier protein, family 1, member 1 | |
Tssr44358 | 4 | 4 | - | TSS region | transcription start site region 44358 | |
Tssr44359 | 4 | 12 | - | TSS region | transcription start site region 44359 | |
Tssr40093 | 4 | 5 | + | TSS region | transcription start site region 40093 | |
Cpgi15241 | 4 | 1195 | CpG island | CpG island 15241 | ||
Tssr44360 | 4 | 11 | - | TSS region | transcription start site region 44360 | |
Tssr44361 | 4 | 35 | - | TSS region | transcription start site region 44361 | |
Tssr1364 | 4 | 15 | - | TSS region | transcription start site region 1364 | |
Tssr44362 | 4 | 8 | - | TSS region | transcription start site region 44362 | |
Gm34863 | 4 | 14314 | + | lncRNA gene | predicted gene, 34863 | |
Cpgi15242 | 4 | 351 | CpG island | CpG island 15242 | ||
Agmat | 4 | 12588 | + | protein coding gene | agmatine ureohydrolase (agmatinase) | |
Tssr40094 | 4 | 29 | + | TSS region | transcription start site region 40094 | |
Tssr40095 | 4 | 18 | + | TSS region | transcription start site region 40095 | |
Tssr40096 | 4 | 22 | + | TSS region | transcription start site region 40096 | |
Cpgi15243 | 4 | 290 | CpG island | CpG island 15243 | ||
Tssr40097 | 4 | 1 | + | TSS region | transcription start site region 40097 | |
Tssr40098 | 4 | 48 | + | TSS region | transcription start site region 40098 | |
Dnajc16 | 4 | 28646 | - | protein coding gene | DnaJ heat shock protein family (Hsp40) member C16 | |
Cpgi15244 | 4 | 1053 | CpG island | CpG island 15244 | ||
Tssr44363 | 4 | 69 | - | TSS region | transcription start site region 44363 | |
Tssr44364 | 4 | 42 | - | TSS region | transcription start site region 44364 | |
Cpgi15245 | 4 | 1104 | CpG island | CpG island 15245 | ||
Tssr44365 | 4 | 5 | - | TSS region | transcription start site region 44365 | |
Casp9 | 4 | 22364 | + | protein coding gene | caspase 9 | |
Tssr40099 | 4 | 30 | + | TSS region | transcription start site region 40099 | |
Tssr40100 | 4 | 20 | + | TSS region | transcription start site region 40100 | |
Tssr40101 | 4 | 30 | + | TSS region | transcription start site region 40101 | |
Tssr40102 | 4 | 14 | + | TSS region | transcription start site region 40102 | |
Cela2a | 4 | 11040 | - | protein coding gene | chymotrypsin-like elastase family, member 2A | |
Tssr40103 | 4 | 5 | + | TSS region | transcription start site region 40103 | |
Tssr44366 | 4 | 70 | - | TSS region | transcription start site region 44366 | |
Tssr40104 | 4 | 38 | + | TSS region | transcription start site region 40104 | |
Tssr44367 | 4 | 2 | - | TSS region | transcription start site region 44367 | |
Tssr44368 | 4 | 4 | - | TSS region | transcription start site region 44368 | |
Tssr40105 | 4 | 39 | + | TSS region | transcription start site region 40105 | |
Tssr44369 | 4 | 12 | - | TSS region | transcription start site region 44369 | |
Tssr44370 | 4 | 38 | - | TSS region | transcription start site region 44370 | |
Tssr40106 | 4 | 27 | + | TSS region | transcription start site region 40106 | |
Tssr44371 | 4 | 21 | - | TSS region | transcription start site region 44371 | |
Tssr40107 | 4 | 8 | + | TSS region | transcription start site region 40107 | |
Tssr44372 | 4 | 24 | - | TSS region | transcription start site region 44372 | |
Tssr44373 | 4 | 6 | - | TSS region | transcription start site region 44373 | |
Cpgi15246 | 4 | 175 | CpG island | CpG island 15246 | ||
Tssr44374 | 4 | 113 | - | TSS region | transcription start site region 44374 | |
Tssr40108 | 4 | 20 | + | TSS region | transcription start site region 40108 | |
Tssr40109 | 4 | 29 | + | TSS region | transcription start site region 40109 | |
Tssr40110 | 4 | 17 | + | TSS region | transcription start site region 40110 | |
Tssr44375 | 4 | 38 | - | TSS region | transcription start site region 44375 | |
Tssr44376 | 4 | 17 | - | TSS region | transcription start site region 44376 | |
D4Mit32 | 4 | 148 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 32 | ||
Tssr44377 | 4 | 8 | - | TSS region | transcription start site region 44377 | |
Tssr44378 | 4 | 10 | - | TSS region | transcription start site region 44378 | |
Tssr40111 | 4 | 25 | + | TSS region | transcription start site region 40111 | |
Tssr44379 | 4 | 10 | - | TSS region | transcription start site region 44379 | |
Tssr40112 | 4 | 13 | + | TSS region | transcription start site region 40112 | |
Tssr44380 | 4 | 102 | - | TSS region | transcription start site region 44380 | |
Tssr40113 | 4 | 38 | + | TSS region | transcription start site region 40113 | |
Tssr40114 | 4 | 19 | + | TSS region | transcription start site region 40114 | |
Tssr44381 | 4 | 10 | - | TSS region | transcription start site region 44381 | |
Tssr40115 | 4 | 13 | + | TSS region | transcription start site region 40115 | |
Tssr44382 | 4 | 47 | - | TSS region | transcription start site region 44382 | |
Tssr40116 | 4 | 26 | + | TSS region | transcription start site region 40116 | |
Tssr44383 | 4 | 50 | - | TSS region | transcription start site region 44383 | |
Tssr44384 | 4 | 5 | - | TSS region | transcription start site region 44384 | |
Tssr44385 | 4 | 3 | - | TSS region | transcription start site region 44385 | |
Tssr44386 | 4 | 61 | - | TSS region | transcription start site region 44386 | |
Tssr44387 | 4 | 27 | - | TSS region | transcription start site region 44387 | |
Tssr44388 | 4 | 19 | - | TSS region | transcription start site region 44388 | |
Tssr44389 | 4 | 29 | - | TSS region | transcription start site region 44389 | |
Tssr44390 | 4 | 15 | - | TSS region | transcription start site region 44390 | |
Lymph3 | 4 | 0 | QTL | lymphocyte differential 3 | ||
Ctrc | 4 | 8120 | - | protein coding gene | chymotrypsin C (caldecrin) | |
Tssr40117 | 4 | 10 | + | TSS region | transcription start site region 40117 | |
Ctrcos | 4 | 2669 | + | antisense lncRNA gene | chymotrypsin C (caldecrin), opposite strand | |
Tssr44391 | 4 | 28 | - | TSS region | transcription start site region 44391 | |
D4Mit65 | 4 | 120 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 65 | ||
Tssr44392 | 4 | 16 | - | TSS region | transcription start site region 44392 | |
Tssr44393 | 4 | 13 | - | TSS region | transcription start site region 44393 | |
Gm35034 | 4 | 10110 | + | lncRNA gene | predicted gene, 35034 | |
Cpgi15247 | 4 | 235 | CpG island | CpG island 15247 | ||
Efhd2 | 4 | 16778 | - | protein coding gene | EF hand domain containing 2 | |
Tssr44394 | 4 | 12 | - | TSS region | transcription start site region 44394 | |
Tssr40118 | 4 | 28 | + | TSS region | transcription start site region 40118 | |
Tssr44395 | 4 | 42 | - | TSS region | transcription start site region 44395 | |
Tssr44396 | 4 | 88 | - | TSS region | transcription start site region 44396 | |
Tssr44397 | 4 | 26 | - | TSS region | transcription start site region 44397 | |
Tssr44398 | 4 | 12 | - | TSS region | transcription start site region 44398 | |
Tssr44399 | 4 | 29 | - | TSS region | transcription start site region 44399 | |
Tssr44400 | 4 | 14 | - | TSS region | transcription start site region 44400 | |
Tssr44401 | 4 | 39 | - | TSS region | transcription start site region 44401 | |
Tssr44402 | 4 | 6 | - | TSS region | transcription start site region 44402 | |
Tssr44403 | 4 | 36 | - | TSS region | transcription start site region 44403 | |
Tssr40119 | 4 | 28 | + | TSS region | transcription start site region 40119 | |
Cpgi15248 | 4 | 1180 | CpG island | CpG island 15248 | ||
Tssr44404 | 4 | 74 | - | TSS region | transcription start site region 44404 | |
Tssr44405 | 4 | 49 | - | TSS region | transcription start site region 44405 | |
Tssr44406 | 4 | 11 | - | TSS region | transcription start site region 44406 | |
Gm29367 | 4 | 1326 | + | lincRNA gene | predicted gene 29367 | |
Gm46874 | 4 | 5936 | - | lncRNA gene | predicted gene, 46874 | |
Fhad1os2 | 4 | 11628 | + | antisense lncRNA gene | forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 2 | |
Fhad1 | 4 | 124644 | - | protein coding gene | forkhead-associated (FHA) phosphopeptide binding domain 1 | |
Adip12 | 4 | 106 | QTL | adiposity 12 | ||
Tafat | 4 | 106 | QTL | TallyHo associated mesenteric fat pad weight | ||
Pltiq1 | 4 | 106 | QTL | phospholipid transfer protein inducibility QTL 1 | ||
D4Mit312 | 4 | 106 | DNA segment | DNA Segment, Chr 4, Massachusetts Institute of Technology 312 | ||
Tssr40120 | 4 | 3 | + | TSS region | transcription start site region 40120 | |
Gm42338 | 4 | 6046 | + | lncRNA gene | predicted gene, 42338 | |
Gm35295 | 4 | 11863 | + | lncRNA gene | predicted gene, 35295 | |
Tssr44407 | 4 | 26 | - | TSS region | transcription start site region 44407 | |
Tssr44408 | 4 | 12 | - | TSS region | transcription start site region 44408 | |
Tssr44409 | 4 | 15 | - | TSS region | transcription start site region 44409 | |
Tssr44410 | 4 | 32 | - | TSS region | transcription start site region 44410 | |
Tssr44411 | 4 | 24 | - | TSS region | transcription start site region 44411 | |
Tssr44412 | 4 | 14 | - | TSS region | transcription start site region 44412 | |
Cpgi15249 | 4 | 219 | CpG island | CpG island 15249 | ||
Gm13059 | 4 | 564 | + | pseudogene | predicted gene 13059 | |
Fhad1os1 | 4 | 3805 | + | antisense lncRNA gene | forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1 | |
D4Mit252 | 4 | 106 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 252 | ||
Cpgi15250 | 4 | 628 | CpG island | CpG island 15250 | ||
Tssr44413 | 4 | 13 | - | TSS region | transcription start site region 44413 | |
Tssr44414 | 4 | 38 | - | TSS region | transcription start site region 44414 | |
4930455G09Rik | 4 | 11097 | + | antisense lncRNA gene | RIKEN cDNA 4930455G09 gene | |
Tssr40121 | 4 | 11 | + | TSS region | transcription start site region 40121 | |
Tssr40122 | 4 | 27 | + | TSS region | transcription start site region 40122 | |
Tmem51 | 4 | 53312 | - | protein coding gene | transmembrane protein 51 | |
Cpgi15251 | 4 | 760 | CpG island | CpG island 15251 | ||
Gm13053 | 4 | 5666 | - | sense intronic lncRNA gene | predicted gene 13053 |