MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:141251130-141352327

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Arhgef19	4	141239499 to 141257564	18065	+	protein coding gene	Rho guanine nucleotide exchange factor (GEF) 19
Gm13055	4	141261762 to 141266016	4254	-	antisense lncRNA gene	predicted gene 13055
Cpgi15216	4	141273158 to 141273397	239		CpG island	CpG island 15216
Tssr40042	4	141278433 to 141278462	29	+	TSS region	transcription start site region 40042
Gm13056	4	141278439 to 141279794	1355	+	lincRNA gene	predicted gene 13056
Tssr40043	4	141282785 to 141282826	41	+	TSS region	transcription start site region 40043
Tssr40044	4	141282917 to 141282936	19	+	TSS region	transcription start site region 40044
Tssr44305	4	141284155 to 141284176	21	-	TSS region	transcription start site region 44305
Tssr40045	4	141284798 to 141284824	26	+	TSS region	transcription start site region 40045
Cpgi15217	4	141287312 to 141287641	329		CpG island	CpG island 15217
Cpgi15218	4	141291175 to 141292278	1103		CpG island	CpG island 15218
Tssr40046	4	141296263 to 141296267	4	+	TSS region	transcription start site region 40046
Cpgi15219	4	141301130 to 141302327	1197		CpG island	CpG island 15219
Tssr40047	4	141301228 to 141301250	22	+	TSS region	transcription start site region 40047
Epha2	4	141301240 to 141329384	28144	+	protein coding gene	Eph receptor A2
Tssr40048	4	141301259 to 141301276	17	+	TSS region	transcription start site region 40048
Cpgi15220	4	141308553 to 141309091	538		CpG island	CpG island 15220
Gm25690	4	141346164 to 141346240	76	+	miRNA gene	predicted gene, 25690
Gm13074	4	141347814 to 141350853	3039	+	lincRNA gene	predicted gene 13074