Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:141211228-141391250

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cplane2 4 141213667 to 141220114 6447 + protein coding gene ciliogenesis and planar polarity effector 2
Cpgi15211 4 141213840 to 141214579 739 CpG island CpG island 15211
Tssr40036 4 141213948 to 141213998 50 + TSS region transcription start site region 40036
Tssr40037 4 141222719 to 141222724 5 + TSS region transcription start site region 40037
C630004L07Rik 4 141238179 to 141239453 1274 - unclassified gene RIKEN cDNA C630004L07 gene
Cpgi15212 4 141239325 to 141239905 580 CpG island CpG island 15212
Arhgef19 4 141239499 to 141257564 18065 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 19
Tssr40038 4 141239569 to 141239633 64 + TSS region transcription start site region 40038
Tssr40039 4 141239634 to 141239657 23 + TSS region transcription start site region 40039
Tssr40040 4 141242850 to 141242909 59 + TSS region transcription start site region 40040
Tssr40041 4 141245080 to 141245102 22 + TSS region transcription start site region 40041
Cpgi15213 4 141246969 to 141248829 1860 CpG island CpG island 15213
Cpgi15214 4 141249063 to 141249466 403 CpG island CpG island 15214
Cpgi15215 4 141250702 to 141251060 358 CpG island CpG island 15215
Gm13055 4 141261762 to 141266016 4254 - antisense lncRNA gene predicted gene 13055
Cpgi15216 4 141273158 to 141273397 239 CpG island CpG island 15216
Tssr40042 4 141278433 to 141278462 29 + TSS region transcription start site region 40042
Gm13056 4 141278439 to 141279794 1355 + lincRNA gene predicted gene 13056
Tssr40043 4 141282785 to 141282826 41 + TSS region transcription start site region 40043
Tssr40044 4 141282917 to 141282936 19 + TSS region transcription start site region 40044
Tssr44305 4 141284155 to 141284176 21 - TSS region transcription start site region 44305
Tssr40045 4 141284798 to 141284824 26 + TSS region transcription start site region 40045
Cpgi15217 4 141287312 to 141287641 329 CpG island CpG island 15217
Cpgi15218 4 141291175 to 141292278 1103 CpG island CpG island 15218
Tssr40046 4 141296263 to 141296267 4 + TSS region transcription start site region 40046
Cpgi15219 4 141301130 to 141302327 1197 CpG island CpG island 15219
Tssr40047 4 141301228 to 141301250 22 + TSS region transcription start site region 40047
Epha2 4 141301240 to 141329384 28144 + protein coding gene Eph receptor A2
Tssr40048 4 141301259 to 141301276 17 + TSS region transcription start site region 40048
Cpgi15220 4 141308553 to 141309091 538 CpG island CpG island 15220
Gm25690 4 141346164 to 141346240 76 + miRNA gene predicted gene, 25690
Gm13074 4 141347814 to 141350853 3039 + lincRNA gene predicted gene 13074
Gm13076 4 141356888 to 141357091 203 - pseudogene predicted gene 13076
Cpgi15221 4 141367898 to 141368798 900 CpG island CpG island 15221
Tssr40049 4 141368116 to 141368179 63 + TSS region transcription start site region 40049
Fam131c 4 141368220 to 141384175 15955 + protein coding gene family with sequence similarity 131, member C
Cpgi15222 4 141382157 to 141382884 727 CpG island CpG island 15222
Tssr40050 4 141382397 to 141382426 29 + TSS region transcription start site region 40050
Clcnka 4 141384611 to 141398706 14095 - protein coding gene chloride channel, voltage-sensitive Ka