Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:140956583-141126803

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm13031 4 140947666 to 140957902 10236 - antisense lncRNA gene predicted gene 13031
Tssr44287 4 140957846 to 140957858 12 - TSS region transcription start site region 44287
Gm34431 4 140960427 to 140961283 856 - lncRNA gene predicted gene, 34431
Cpgi15201 4 140961109 to 140962084 975 CpG island CpG island 15201
Sdhb 4 140961271 to 140979197 17926 + protein coding gene succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
Tssr40003 4 140961282 to 140961293 11 + TSS region transcription start site region 40003
Tssr40004 4 140961301 to 140961312 11 + TSS region transcription start site region 40004
Tssr40005 4 140961372 to 140961402 30 + TSS region transcription start site region 40005
Tssr40006 4 140961404 to 140961415 11 + TSS region transcription start site region 40006
Tssr40007 4 140963194 to 140963214 20 + TSS region transcription start site region 40007
Tssr40008 4 140966510 to 140966515 5 + TSS region transcription start site region 40008
Tssr40009 4 140971837 to 140971856 19 + TSS region transcription start site region 40009
Tssr40010 4 140971871 to 140971888 17 + TSS region transcription start site region 40010
Tssr40011 4 140971889 to 140971904 15 + TSS region transcription start site region 40011
Tssr40012 4 140971980 to 140971996 16 + TSS region transcription start site region 40012
Tssr40013 4 140977386 to 140977419 33 + TSS region transcription start site region 40013
Tssr44288 4 140979184 to 140979196 12 - TSS region transcription start site region 44288
Tssr40014 4 140983550 to 140983565 15 + TSS region transcription start site region 40014
Cpgi15202 4 140986604 to 140987381 777 CpG island CpG island 15202
Atp13a2 4 140986873 to 141007330 20457 + protein coding gene ATPase type 13A2
Tssr40015 4 140986881 to 140986936 55 + TSS region transcription start site region 40015
Tssr40016 4 140992365 to 140992378 13 + TSS region transcription start site region 40016
Tssr40017 4 140992416 to 140992427 11 + TSS region transcription start site region 40017
Tssr40018 4 140995556 to 140995583 27 + TSS region transcription start site region 40018
Tssr40019 4 141005085 to 141005102 17 + TSS region transcription start site region 40019
Mfap2 4 141010424 to 141015984 5560 + protein coding gene microfibrillar-associated protein 2
Cpgi15203 4 141010452 to 141010997 545 CpG island CpG island 15203
Tssr40020 4 141010673 to 141010696 23 + TSS region transcription start site region 40020
Tssr40021 4 141012835 to 141012852 17 + TSS region transcription start site region 40021
Tssr40022 4 141013799 to 141013820 21 + TSS region transcription start site region 40022
Crocc 4 141016637 to 141060550 43913 - protein coding gene ciliary rootlet coiled-coil, rootletin
Cpgi15204 4 141021618 to 141021773 155 CpG island CpG island 15204
Cpgi15205 4 141040972 to 141041320 348 CpG island CpG island 15205
Cpgi15206 4 141041583 to 141041803 220 CpG island CpG island 15206
Tssr44289 4 141053247 to 141053258 11 - TSS region transcription start site region 44289
Tssr44290 4 141053660 to 141053697 37 - TSS region transcription start site region 44290
Tssr44291 4 141053704 to 141053724 20 - TSS region transcription start site region 44291
Cpgi15207 4 141060017 to 141061236 1219 CpG island CpG island 15207
Tssr44292 4 141060536 to 141060567 31 - TSS region transcription start site region 44292
Necap2 4 141066512 to 141078357 11845 - protein coding gene NECAP endocytosis associated 2
Tssr44293 4 141067261 to 141067268 7 - TSS region transcription start site region 44293
Cpgi15208 4 141077574 to 141078607 1033 CpG island CpG island 15208
Tssr40023 4 141077944 to 141077984 40 + TSS region transcription start site region 40023
Tssr44294 4 141078302 to 141078338 36 - TSS region transcription start site region 44294
Tssr40024 4 141078443 to 141078444 1 + TSS region transcription start site region 40024
Gm13047 4 141084864 to 141085678 814 + pseudogene predicted gene 13047
Tssr44295 4 141088216 to 141088223 7 - TSS region transcription start site region 44295
Spata21 4 141088333 to 141112760 24427 + protein coding gene spermatogenesis associated 21
Tssr40025 4 141088338 to 141088350 12 + TSS region transcription start site region 40025
Tssr40026 4 141096938 to 141096950 12 + TSS region transcription start site region 40026
Tssr40027 4 141097081 to 141097092 11 + TSS region transcription start site region 40027
Tssr40028 4 141099789 to 141099792 3 + TSS region transcription start site region 40028
Tssr40029 4 141107098 to 141107107 9 + TSS region transcription start site region 40029
Szrd1 4 141113001 to 141139775 26774 - protein coding gene SUZ RNA binding domain containing 1
Tssr44296 4 141113669 to 141113686 17 - TSS region transcription start site region 44296
Tssr44297 4 141115273 to 141115291 18 - TSS region transcription start site region 44297
Tssr44298 4 141115340 to 141115393 53 - TSS region transcription start site region 44298
Tssr44299 4 141115649 to 141115669 20 - TSS region transcription start site region 44299
4921514A10Rik 4 141115660 to 141118087 2427 + antisense lncRNA gene RIKEN cDNA 4921514A10 gene