Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Pwbwq9 | 4 | 35728414 | QTL | post-weaning body weight QTL 9 | ||
Pwgrq4 | 4 | 35728414 | QTL | pre-weaning growth rate QTL 4 | ||
Pwbwq4 | 4 | 35728414 | QTL | pre-weaning body weight QTL 4 | ||
Pwbwq8 | 4 | 35728414 | QTL | post-weaning body weight QTL 8 | ||
Shali2 | 4 | 17684181 | QTL | survival time to hyperoxic acute lung injury 2 | ||
Nba1 | 4 | 9228551 | QTL | New Zealand Black autoimmunity 1 | ||
Gm13021 | 4 | 9378 | + | lincRNA gene | predicted gene 13021 | |
Tssr39968 | 4 | 46 | + | TSS region | transcription start site region 39968 | |
Gm13026 | 4 | 23328 | + | lincRNA gene | predicted gene 13026 | |
Arhgef10l | 4 | 151420 | - | protein coding gene | Rho guanine nucleotide exchange factor (GEF) 10-like | |
Tssr44248 | 4 | 11 | - | TSS region | transcription start site region 44248 | |
Cpgi15192 | 4 | 330 | CpG island | CpG island 15192 | ||
Tssr44249 | 4 | 29 | - | TSS region | transcription start site region 44249 | |
Tssr44250 | 4 | 26 | - | TSS region | transcription start site region 44250 | |
Tssr44251 | 4 | 26 | - | TSS region | transcription start site region 44251 | |
Tssr44252 | 4 | 21 | - | TSS region | transcription start site region 44252 | |
Tssr44253 | 4 | 11 | - | TSS region | transcription start site region 44253 | |
Tssr44254 | 4 | 40 | - | TSS region | transcription start site region 44254 | |
Tssr44255 | 4 | 17 | - | TSS region | transcription start site region 44255 | |
Tssr44256 | 4 | 16 | - | TSS region | transcription start site region 44256 | |
Gm42335 | 4 | 1460 | + | lncRNA gene | predicted gene, 42335 | |
Tssr44257 | 4 | 31 | - | TSS region | transcription start site region 44257 | |
Tssr44258 | 4 | 22 | - | TSS region | transcription start site region 44258 | |
Tssr44259 | 4 | 24 | - | TSS region | transcription start site region 44259 | |
Tssr44260 | 4 | 30 | - | TSS region | transcription start site region 44260 | |
Cpgi15193 | 4 | 1109 | CpG island | CpG island 15193 | ||
Tssr44261 | 4 | 13 | - | TSS region | transcription start site region 44261 | |
Tssr44262 | 4 | 45 | - | TSS region | transcription start site region 44262 | |
Tssr44263 | 4 | 13 | - | TSS region | transcription start site region 44263 | |
Tssr44264 | 4 | 46 | - | TSS region | transcription start site region 44264 | |
Tssr44265 | 4 | 11 | - | TSS region | transcription start site region 44265 | |
Tssr44266 | 4 | 10 | - | TSS region | transcription start site region 44266 | |
Tssr44267 | 4 | 13 | - | TSS region | transcription start site region 44267 | |
Tssr44268 | 4 | 12 | - | TSS region | transcription start site region 44268 | |
Tssr44269 | 4 | 22 | - | TSS region | transcription start site region 44269 | |
Gm13025 | 4 | 4864 | + | lincRNA gene | predicted gene 13025 | |
Tssr39969 | 4 | 4 | + | TSS region | transcription start site region 39969 | |
Gm23045 | 4 | 95 | + | miRNA gene | predicted gene, 23045 | |
Cpgi15194 | 4 | 466 | CpG island | CpG island 15194 | ||
Tssr44270 | 4 | 7 | - | TSS region | transcription start site region 44270 | |
Tssr44271 | 4 | 18 | - | TSS region | transcription start site region 44271 | |
Tssr44272 | 4 | 24 | - | TSS region | transcription start site region 44272 | |
Tssr39970 | 4 | 16 | + | TSS region | transcription start site region 39970 | |
Tssr39971 | 4 | 20 | + | TSS region | transcription start site region 39971 | |
Tssr39972 | 4 | 11 | + | TSS region | transcription start site region 39972 | |
Tssr39973 | 4 | 12 | + | TSS region | transcription start site region 39973 | |
Tssr39974 | 4 | 11 | + | TSS region | transcription start site region 39974 | |
Tssr39975 | 4 | 14 | + | TSS region | transcription start site region 39975 | |
Tssr39976 | 4 | 42 | + | TSS region | transcription start site region 39976 | |
Tssr39977 | 4 | 11 | + | TSS region | transcription start site region 39977 | |
Cpgi15195 | 4 | 2309 | CpG island | CpG island 15195 | ||
Tssr44273 | 4 | 20 | - | TSS region | transcription start site region 44273 | |
Tssr39978 | 4 | 11 | + | TSS region | transcription start site region 39978 | |
Tssr39979 | 4 | 16 | + | TSS region | transcription start site region 39979 | |
Tssr39980 | 4 | 43 | + | TSS region | transcription start site region 39980 | |
Rcc2 | 4 | 21747 | + | protein coding gene | regulator of chromosome condensation 2 | |
Tssr39981 | 4 | 11 | + | TSS region | transcription start site region 39981 | |
Tssr39982 | 4 | 26 | + | TSS region | transcription start site region 39982 | |
Tssr39983 | 4 | 11 | + | TSS region | transcription start site region 39983 | |
Tssr39984 | 4 | 6 | + | TSS region | transcription start site region 39984 | |
Tssr39985 | 4 | 27 | + | TSS region | transcription start site region 39985 | |
Tssr39986 | 4 | 26 | + | TSS region | transcription start site region 39986 | |
Tssr39987 | 4 | 69 | + | TSS region | transcription start site region 39987 | |
Tssr39988 | 4 | 21 | + | TSS region | transcription start site region 39988 | |
Tssr39989 | 4 | 22 | + | TSS region | transcription start site region 39989 | |
Tssr44274 | 4 | 50 | - | TSS region | transcription start site region 44274 | |
Tssr44275 | 4 | 9 | - | TSS region | transcription start site region 44275 | |
Tssr39990 | 4 | 2 | + | TSS region | transcription start site region 39990 | |
Tssr39991 | 4 | 11 | + | TSS region | transcription start site region 39991 | |
Tssr39992 | 4 | 39 | + | TSS region | transcription start site region 39992 | |
Gm25951 | 4 | 63 | + | miRNA gene | predicted gene, 25951 | |
Tssr39993 | 4 | 27 | + | TSS region | transcription start site region 39993 | |
Tssr39994 | 4 | 25 | + | TSS region | transcription start site region 39994 | |
Padi6 | 4 | 15288 | - | protein coding gene | peptidyl arginine deiminase, type VI | |
D4Mit64 | 4 | 187 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 64 | ||
Lvrq8 | 4 | -51677060 | QTL | liver weight QTL 8 | ||
W10q10 | 4 | -51677060 | QTL | weight 10 weeks QTL 10 | ||
W3q17 | 4 | -51677060 | QTL | weight 3 weeks QTL 17 | ||
W6q13 | 4 | -51677060 | QTL | weight 6 weeks QTL 13 | ||
Tssr44276 | 4 | 5 | - | TSS region | transcription start site region 44276 | |
Padi4 | 4 | 28371 | - | protein coding gene | peptidyl arginine deiminase, type IV | |
Cpgi15196 | 4 | 363 | CpG island | CpG island 15196 | ||
Tssr1360 | 4 | 7 | - | TSS region | transcription start site region 1360 | |
Tssr44277 | 4 | 17 | - | TSS region | transcription start site region 44277 | |
Tssr44278 | 4 | 18 | - | TSS region | transcription start site region 44278 | |
Tssr44279 | 4 | 16 | - | TSS region | transcription start site region 44279 | |
Tssr44280 | 4 | 16 | - | TSS region | transcription start site region 44280 | |
Padi3 | 4 | 25279 | - | protein coding gene | peptidyl arginine deiminase, type III | |
Tssr44281 | 4 | 3 | - | TSS region | transcription start site region 44281 | |
Gm13032 | 4 | 6518 | + | lncRNA gene | predicted gene 13032 | |
Padi1 | 4 | 32795 | - | protein coding gene | peptidyl arginine deiminase, type I | |
Tssr44282 | 4 | 30 | - | TSS region | transcription start site region 44282 | |
Cpgi15197 | 4 | 333 | CpG island | CpG island 15197 | ||
Tssr44283 | 4 | 46 | - | TSS region | transcription start site region 44283 | |
Tssr44284 | 4 | 14 | - | TSS region | transcription start site region 44284 | |
Tssr44285 | 4 | 15 | - | TSS region | transcription start site region 44285 | |
Cpgi15198 | 4 | 475 | CpG island | CpG island 15198 | ||
4930515B02Rik | 4 | 5362 | + | lincRNA gene | RIKEN cDNA 4930515B02 gene | |
D4Mit179 | 4 | 124 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 179 | ||
Cpgi15199 | 4 | 428 | CpG island | CpG island 15199 | ||
Tssr39995 | 4 | 18 | + | TSS region | transcription start site region 39995 | |
Padi2 | 4 | 46242 | + | protein coding gene | peptidyl arginine deiminase, type II | |
Tssr39996 | 4 | 18 | + | TSS region | transcription start site region 39996 | |
Tssr44286 | 4 | 7 | - | TSS region | transcription start site region 44286 | |
Gm46719 | 4 | 1364 | - | lncRNA gene | predicted gene, 46719 | |
Cpgi15200 | 4 | 248 | CpG island | CpG island 15200 | ||
Gm26226 | 4 | 115 | + | snRNA gene | predicted gene, 26226 | |
Tssr39997 | 4 | 20 | + | TSS region | transcription start site region 39997 | |
Tssr39998 | 4 | 21 | + | TSS region | transcription start site region 39998 | |
Tssr39999 | 4 | 23 | + | TSS region | transcription start site region 39999 | |
Gm34375 | 4 | 4830 | - | lncRNA gene | predicted gene, 34375 | |
Tssr40000 | 4 | 52 | + | TSS region | transcription start site region 40000 | |
Tssr40001 | 4 | 9 | + | TSS region | transcription start site region 40001 | |
Gm13031 | 4 | 10236 | - | antisense lncRNA gene | predicted gene 13031 | |
Tssr40002 | 4 | 17 | + | TSS region | transcription start site region 40002 | |
Tssr44287 | 4 | 12 | - | TSS region | transcription start site region 44287 | |
Gm34431 | 4 | 856 | - | lncRNA gene | predicted gene, 34431 | |
Cpgi15201 | 4 | 975 | CpG island | CpG island 15201 | ||
Sdhb | 4 | 17926 | + | protein coding gene | succinate dehydrogenase complex, subunit B, iron sulfur (Ip) | |
Tssr40003 | 4 | 11 | + | TSS region | transcription start site region 40003 | |
Tssr40004 | 4 | 11 | + | TSS region | transcription start site region 40004 | |
Tssr40005 | 4 | 30 | + | TSS region | transcription start site region 40005 | |
Tssr40006 | 4 | 11 | + | TSS region | transcription start site region 40006 | |
Tssr40007 | 4 | 20 | + | TSS region | transcription start site region 40007 | |
Tssr40008 | 4 | 5 | + | TSS region | transcription start site region 40008 | |
Tssr40009 | 4 | 19 | + | TSS region | transcription start site region 40009 | |
Tssr40010 | 4 | 17 | + | TSS region | transcription start site region 40010 | |
Tssr40011 | 4 | 15 | + | TSS region | transcription start site region 40011 | |
Tssr40012 | 4 | 16 | + | TSS region | transcription start site region 40012 | |
Tssr40013 | 4 | 33 | + | TSS region | transcription start site region 40013 | |
Tssr44288 | 4 | 12 | - | TSS region | transcription start site region 44288 | |
Tssr40014 | 4 | 15 | + | TSS region | transcription start site region 40014 | |
Cpgi15202 | 4 | 777 | CpG island | CpG island 15202 | ||
Atp13a2 | 4 | 20457 | + | protein coding gene | ATPase type 13A2 | |
Tssr40015 | 4 | 55 | + | TSS region | transcription start site region 40015 | |
Tssr40016 | 4 | 13 | + | TSS region | transcription start site region 40016 | |
Tssr40017 | 4 | 11 | + | TSS region | transcription start site region 40017 | |
Tssr40018 | 4 | 27 | + | TSS region | transcription start site region 40018 | |
Tssr40019 | 4 | 17 | + | TSS region | transcription start site region 40019 | |
Mfap2 | 4 | 5560 | + | protein coding gene | microfibrillar-associated protein 2 | |
Cpgi15203 | 4 | 545 | CpG island | CpG island 15203 | ||
Tssr40020 | 4 | 23 | + | TSS region | transcription start site region 40020 | |
Tssr40021 | 4 | 17 | + | TSS region | transcription start site region 40021 | |
Tssr40022 | 4 | 21 | + | TSS region | transcription start site region 40022 | |
Crocc | 4 | 43913 | - | protein coding gene | ciliary rootlet coiled-coil, rootletin | |
Cpgi15204 | 4 | 155 | CpG island | CpG island 15204 | ||
Cpgi15205 | 4 | 348 | CpG island | CpG island 15205 | ||
Cpgi15206 | 4 | 220 | CpG island | CpG island 15206 | ||
Tssr44289 | 4 | 11 | - | TSS region | transcription start site region 44289 | |
Tssr44290 | 4 | 37 | - | TSS region | transcription start site region 44290 | |
Tssr44291 | 4 | 20 | - | TSS region | transcription start site region 44291 | |
Cpgi15207 | 4 | 1219 | CpG island | CpG island 15207 | ||
Tssr44292 | 4 | 31 | - | TSS region | transcription start site region 44292 | |
Necap2 | 4 | 11845 | - | protein coding gene | NECAP endocytosis associated 2 | |
Tssr44293 | 4 | 7 | - | TSS region | transcription start site region 44293 | |
Cpgi15208 | 4 | 1033 | CpG island | CpG island 15208 | ||
Tssr40023 | 4 | 40 | + | TSS region | transcription start site region 40023 | |
Tssr44294 | 4 | 36 | - | TSS region | transcription start site region 44294 | |
Tssr40024 | 4 | 1 | + | TSS region | transcription start site region 40024 | |
Gm13047 | 4 | 814 | + | pseudogene | predicted gene 13047 | |
Tssr44295 | 4 | 7 | - | TSS region | transcription start site region 44295 | |
Spata21 | 4 | 24427 | + | protein coding gene | spermatogenesis associated 21 | |
Tssr40025 | 4 | 12 | + | TSS region | transcription start site region 40025 | |
Tssr40026 | 4 | 12 | + | TSS region | transcription start site region 40026 | |
Tssr40027 | 4 | 11 | + | TSS region | transcription start site region 40027 | |
Tssr40028 | 4 | 3 | + | TSS region | transcription start site region 40028 | |
Tssr40029 | 4 | 9 | + | TSS region | transcription start site region 40029 | |
Szrd1 | 4 | 26774 | - | protein coding gene | SUZ RNA binding domain containing 1 | |
Tssr44296 | 4 | 17 | - | TSS region | transcription start site region 44296 | |
Tssr44297 | 4 | 18 | - | TSS region | transcription start site region 44297 | |
Tssr44298 | 4 | 53 | - | TSS region | transcription start site region 44298 | |
Tssr44299 | 4 | 20 | - | TSS region | transcription start site region 44299 | |
4921514A10Rik | 4 | 2427 | + | antisense lncRNA gene | RIKEN cDNA 4921514A10 gene | |
Tssr44300 | 4 | 40 | - | TSS region | transcription start site region 44300 | |
Tssr44301 | 4 | 5 | - | TSS region | transcription start site region 44301 | |
Cpgi15209 | 4 | 1036 | CpG island | CpG island 15209 | ||
Tssr44302 | 4 | 25 | - | TSS region | transcription start site region 44302 | |
Tssr44303 | 4 | 9 | - | TSS region | transcription start site region 44303 | |
Cpgi15210 | 4 | 1436 | CpG island | CpG island 15210 | ||
Tssr40030 | 4 | 60 | + | TSS region | transcription start site region 40030 | |
Fbxo42 | 4 | 56149 | + | protein coding gene | F-box protein 42 | |
Tssr40031 | 4 | 7 | + | TSS region | transcription start site region 40031 | |
Tssr40032 | 4 | 39 | + | TSS region | transcription start site region 40032 | |
D4Mit48 | 4 | 148 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 48 | ||
Tssr40033 | 4 | 5 | + | TSS region | transcription start site region 40033 | |
Tssr44304 | 4 | 13 | - | TSS region | transcription start site region 44304 | |
Tssr40034 | 4 | 21 | + | TSS region | transcription start site region 40034 | |
Tssr40035 | 4 | 23 | + | TSS region | transcription start site region 40035 | |
Cplane2 | 4 | 6447 | + | protein coding gene | ciliogenesis and planar polarity effector 2 | |
Cpgi15211 | 4 | 739 | CpG island | CpG island 15211 | ||
Tssr40036 | 4 | 50 | + | TSS region | transcription start site region 40036 | |
Tssr40037 | 4 | 5 | + | TSS region | transcription start site region 40037 | |
C630004L07Rik | 4 | 1274 | - | unclassified gene | RIKEN cDNA C630004L07 gene | |
Cpgi15212 | 4 | 580 | CpG island | CpG island 15212 | ||
Arhgef19 | 4 | 18065 | + | protein coding gene | Rho guanine nucleotide exchange factor (GEF) 19 | |
Tssr40038 | 4 | 64 | + | TSS region | transcription start site region 40038 | |
Tssr40039 | 4 | 23 | + | TSS region | transcription start site region 40039 | |
Tssr40040 | 4 | 59 | + | TSS region | transcription start site region 40040 | |
Tssr40041 | 4 | 22 | + | TSS region | transcription start site region 40041 | |
Cpgi15213 | 4 | 1860 | CpG island | CpG island 15213 |