Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:139956823-140516837

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Klhdc7a 4 139962173 to 139968026 5853 - protein coding gene kelch domain containing 7A
Cpgi15183 4 139965495 to 139965848 353 CpG island CpG island 15183
Tssr44237 4 139967115 to 139967133 18 - TSS region transcription start site region 44237
Tssr44238 4 139967147 to 139967161 14 - TSS region transcription start site region 44238
Mir2139 4 139967526 to 139967620 94 - miRNA gene microRNA 2139
Tssr44239 4 139967583 to 139967618 35 - TSS region transcription start site region 44239
Tssr44240 4 139967619 to 139967630 11 - TSS region transcription start site region 44240
Tssr44241 4 139994017 to 139994019 2 - TSS region transcription start site region 44241
Cpgi15184 4 140004598 to 140004877 279 CpG island CpG island 15184
Igsf21 4 140026846 to 140246784 219938 - protein coding gene immunoglobulin superfamily, member 21
Cpgi15185 4 140028060 to 140028287 227 CpG island CpG island 15185
Cpgi15186 4 140034329 to 140034818 489 CpG island CpG island 15186
Tssr44242 4 140037729 to 140037741 12 - TSS region transcription start site region 44242
Tssr39964 4 140038351 to 140038361 10 + TSS region transcription start site region 39964
Cpgi15187 4 140103257 to 140103688 431 CpG island CpG island 15187
Tssr44243 4 140106253 to 140106286 33 - TSS region transcription start site region 44243
Cpgi15188 4 140109184 to 140109546 362 CpG island CpG island 15188
Tssr1359 4 140131834 to 140131846 12 + TSS region transcription start site region 1359
Tssr39965 4 140131854 to 140131862 8 + TSS region transcription start site region 39965
Tssr39966 4 140131866 to 140131881 15 + TSS region transcription start site region 39966
Gm13027 4 140131877 to 140133351 1474 + antisense lncRNA gene predicted gene 13027
Gm13029 4 140142873 to 140144633 1760 + antisense lncRNA gene predicted gene 13029
Gm33542 4 140218487 to 140222459 3972 + lncRNA gene predicted gene, 33542
Tssr44244 4 140236823 to 140236837 14 - TSS region transcription start site region 44244
Cpgi15189 4 140243409 to 140243632 223 CpG island CpG island 15189
Cpgi15190 4 140244004 to 140244829 825 CpG island CpG island 15190
Cpgi15191 4 140245818 to 140247480 1662 CpG island CpG island 15191
Tssr44245 4 140246751 to 140246793 42 - TSS region transcription start site region 44245
Tssr44246 4 140246794 to 140246824 30 - TSS region transcription start site region 44246
Tssr44247 4 140246918 to 140246946 28 - TSS region transcription start site region 44247
Gm9867 4 140320656 to 140323302 2646 - lncRNA gene predicted gene 9867
Gm33895 4 140323445 to 140330523 7078 + lncRNA gene predicted gene, 33895
Gm34074 4 140355406 to 140361939 6533 + lncRNA gene predicted gene, 34074
Gm13016 4 140380630 to 140385574 4944 + lincRNA gene predicted gene 13016
Gm13017 4 140391148 to 140396604 5456 + lincRNA gene predicted gene 13017
Tssr39967 4 140395748 to 140395772 24 + TSS region transcription start site region 39967
Gm13021 4 140422553 to 140431931 9378 + lincRNA gene predicted gene 13021
Tssr39968 4 140426379 to 140426425 46 + TSS region transcription start site region 39968
Gm13026 4 140437963 to 140461291 23328 + lincRNA gene predicted gene 13026
Arhgef10l 4 140514485 to 140665905 151420 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 10-like