MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:139524644-139624690

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Iffo2	4	139530548 to 139620382	89834	+	protein coding gene	intermediate filament family orphan 2
Cpgi15170	4	139556023 to 139556265	242		CpG island	CpG island 15170
Cpgi15171	4	139573686 to 139575985	2299		CpG island	CpG island 15171
Tssr39955	4	139574644 to 139574690	46	+	TSS region	transcription start site region 39955
Tssr39956	4	139574697 to 139574725	28	+	TSS region	transcription start site region 39956
Gm25571	4	139588876 to 139588977	101	-	miRNA gene	predicted gene, 25571
Tssr39957	4	139592985 to 139592990	5	+	TSS region	transcription start site region 39957
Tssr44231	4	139599121 to 139599145	24	-	TSS region	transcription start site region 44231
Gm21969	4	139603186 to 139662691	59505	+	protein coding gene	predicted gene 21969
Cpgi15172	4	139614832 to 139615079	247		CpG island	CpG island 15172
Cpgi15173	4	139616334 to 139616667	333		CpG island	CpG island 15173
Tssr44232	4	139622625 to 139622675	50	-	TSS region	transcription start site region 44232
Tssr39958	4	139622842 to 139622902	60	+	TSS region	transcription start site region 39958
Aldh4a1	4	139622871 to 139649691	26820	+	protein coding gene	aldehyde dehydrogenase 4 family, member A1
Pphc2	4	139622871 to 150009023	10386152		heritable phenotypic marker	polyunsaturated fat induced postprandial hypercholesterolemia
Panc1	4	139622871 to 150009023	10386152		heritable phenotypic marker	pancreas protein 1
Cpgi15174	4	139622967 to 139623633	666		CpG island	CpG island 15174
Tssr39959	4	139623089 to 139623134	45	+	TSS region	transcription start site region 39959