Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:139308304-139368360

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pqlc2 4 139294029 to 139310708 16679 - protein coding gene PQ loop repeat containing 2
Cpgi15163 4 139310141 to 139311756 1615 CpG island CpG island 15163
Tssr44223 4 139310646 to 139310664 18 - TSS region transcription start site region 44223
Tssr44224 4 139310665 to 139310702 37 - TSS region transcription start site region 44224
Tssr39935 4 139310732 to 139310793 61 + TSS region transcription start site region 39935
Akr7a5 4 139310744 to 139318426 7682 + protein coding gene aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase)
Cpgi15164 4 139336880 to 139337306 426 CpG island CpG island 15164
Tssr39936 4 139338092 to 139338103 11 + TSS region transcription start site region 39936
Tssr39937 4 139338132 to 139338138 6 + TSS region transcription start site region 39937
Cpgi15165 4 139338191 to 139338454 263 CpG island CpG island 15165
Tssr39938 4 139338204 to 139338230 26 + TSS region transcription start site region 39938
Gm25732 4 139338206 to 139338265 59 + miRNA gene predicted gene, 25732
Tssr39939 4 139338282 to 139338301 19 + TSS region transcription start site region 39939
Gm24245 4 139338304 to 139338360 56 + miRNA gene predicted gene, 24245
Gm13019 4 139342183 to 139343333 1150 + pseudogene predicted gene 13019
Ccnd3-ps 4 139345300 to 139346180 880 - pseudogene cyclin D3, pseudogene
Cpgi15166 4 139345777 to 139346240 463 CpG island CpG island 15166
Tssr44225 4 139345995 to 139346020 25 - TSS region transcription start site region 44225
Mrto4 4 139347440 to 139352576 5136 - protein coding gene mRNA turnover 4, ribosome maturation factor
Cpgi15167 4 139351929 to 139352865 936 CpG island CpG island 15167
Tssr44226 4 139352299 to 139352313 14 - TSS region transcription start site region 44226
Tssr44227 4 139352317 to 139352346 29 - TSS region transcription start site region 44227
Tssr44228 4 139352505 to 139352527 22 - TSS region transcription start site region 44228
Tssr44229 4 139352538 to 139352586 48 - TSS region transcription start site region 44229
Emc1 4 139352587 to 139378730 26143 + protein coding gene ER membrane protein complex subunit 1
Tssr39940 4 139352589 to 139352621 32 + TSS region transcription start site region 39940
Tssr39941 4 139360105 to 139360108 3 + TSS region transcription start site region 39941
Tssr39942 4 139363565 to 139363575 10 + TSS region transcription start site region 39942
Tssr39943 4 139363592 to 139363622 30 + TSS region transcription start site region 39943