MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:138932885-139012920

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm18097	4	138935213 to 138935714	501	-	pseudogene	predicted gene, 18097
Gm33011	4	138936447 to 138938608	2161	-	lncRNA gene	predicted gene, 33011
Tssr44194	4	138938615 to 138938631	16	-	TSS region	transcription start site region 44194
Gm42333	4	138961910 to 138964681	2771	-	lncRNA gene	predicted gene, 42333
Rnf186	4	138967112 to 138968360	1248	+	protein coding gene	ring finger protein 186
Tssr39892	4	138967112 to 138967127	15	+	TSS region	transcription start site region 39892
Tssr39893	4	138967154 to 138967157	3	+	TSS region	transcription start site region 39893
Tssr1355	4	138967756 to 138967767	11	-	TSS region	transcription start site region 1355
Tssr44195	4	138968995 to 138969012	17	-	TSS region	transcription start site region 44195
Tssr44196	4	138969015 to 138969026	11	-	TSS region	transcription start site region 44196
Cpgi15158	4	138972745 to 138973642	897		CpG island	CpG island 15158
Tssr44197	4	138972805 to 138972834	29	-	TSS region	transcription start site region 44197
Tssr39894	4	138972885 to 138972920	35	+	TSS region	transcription start site region 39894
Tmco4	4	138972888 to 139059171	86283	+	protein coding gene	transmembrane and coiled-coil domains 4
Tssr39895	4	138973241 to 138973255	14	+	TSS region	transcription start site region 39895
Tssr44198	4	138973549 to 138973565	16	-	TSS region	transcription start site region 44198
Tssr39896	4	138983701 to 138983723	22	+	TSS region	transcription start site region 39896
Gm33214	4	139003191 to 139019566	16375	-	lncRNA gene	predicted gene, 33214