Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:138478978-138817636

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shm2 4 137148689 to 138615442 1466753 QTL sperm head morphology 2
Gm32549 4 138497634 to 138528513 30879 + lncRNA gene predicted gene, 32549
D4Mit188 4 138508652 to 138508790 138 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 188
Cpgi15154 4 138554777 to 138555042 265 CpG island CpG island 15154
Cpgi15155 4 138555472 to 138555861 389 CpG island CpG island 15155
Vwa5b1 4 138565360 to 138635884 70524 - protein coding gene von Willebrand factor A domain containing 5B1
Gm22961 4 138587624 to 138587729 105 - snRNA gene predicted gene, 22961
Elsgp1 4 138615338 to 138615442 104 QTL elevated serum gp70 1
Chlq16 4 138615338 to 138615442 104 QTL circulating hormone level QTL 16
D4Mit170 4 138615338 to 138615442 104 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 170
Stheal12 4 138615338 to 138615442 104 QTL soft tissue heal 12
Ctrcts 4 138615442 to 45709925 -92905517 QTL cataract severity
Tssr44171 4 138623978 to 138623999 21 - TSS region transcription start site region 44171
Tssr44172 4 138624001 to 138624021 20 - TSS region transcription start site region 44172
Tssr39872 4 138630540 to 138630543 3 + TSS region transcription start site region 39872
Gm32662 4 138638978 to 138657636 18658 + lncRNA gene predicted gene, 32662
Tssr39873 4 138648544 to 138648580 36 + TSS region transcription start site region 39873
Gm32770 4 138677510 to 138711737 34227 + lncRNA gene predicted gene, 32770
4930563F15Rik 4 138677767 to 138679000 1233 unclassified gene RIKEN cDNA 4930563F15 gene
Tssr39874 4 138706868 to 138706908 40 + TSS region transcription start site region 39874
Ubxn10 4 138709837 to 138737167 27330 - protein coding gene UBX domain protein 10
Tssr44173 4 138725210 to 138725258 48 - TSS region transcription start site region 44173
Tssr44174 4 138725262 to 138725267 5 - TSS region transcription start site region 44174
Tssr39875 4 138725282 to 138725309 27 + TSS region transcription start site region 39875
Pla2g2c 4 138725325 to 138744575 19250 + protein coding gene phospholipase A2, group IIC
Pla2g2f 4 138750533 to 138757598 7065 - protein coding gene phospholipase A2, group IIF
Tssr44175 4 138757491 to 138757496 5 - TSS region transcription start site region 44175
Tssr44176 4 138757578 to 138757606 28 - TSS region transcription start site region 44176
Gm42332 4 138761374 to 138769700 8326 - lncRNA gene predicted gene, 42332
Tssr44177 4 138770873 to 138770885 12 - TSS region transcription start site region 44177
Tssr44178 4 138770908 to 138770921 13 - TSS region transcription start site region 44178
Gm32871 4 138772493 to 138780240 7747 - lncRNA gene predicted gene, 32871
Pla2g2d 4 138775735 to 138782046 6311 + protein coding gene phospholipase A2, group IID
Tssr39876 4 138775776 to 138775784 8 + TSS region transcription start site region 39876
Tssr39877 4 138775797 to 138775814 17 + TSS region transcription start site region 39877
Pla2g5 4 138799247 to 138863469 64222 - protein coding gene phospholipase A2, group V
Tssr44179 4 138806273 to 138806288 15 - TSS region transcription start site region 44179
Tssr44180 4 138809804 to 138809812 8 - TSS region transcription start site region 44180
Tssr44181 4 138809833 to 138809844 11 - TSS region transcription start site region 44181