Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:13840198-14640209

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Runx1t1 4 13743436 to 13893649 150213 + protein coding gene RUNX1 translocation partner 1
4833406L22Rik 4 13854781 to 13855749 968 unclassified gene RIKEN cDNA 4833406L22 gene
Tssr36529 4 13854804 to 13854808 4 + TSS region transcription start site region 36529
Tssr36530 4 13890079 to 13890082 3 + TSS region transcription start site region 36530
Tssr36531 4 13892204 to 13892212 8 + TSS region transcription start site region 36531
Gm11823 4 13919954 to 13995193 75239 - lincRNA gene predicted gene 11823
Lyr2 4 14010457 to 63365441 49354984 QTL lymphoma resistance 2
D4Mit18 4 14010457 to 14010682 225 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 18
Gm24068 4 14079809 to 14079940 131 - snoRNA gene predicted gene, 24068
Tssr36532 4 14169975 to 14169984 9 + TSS region transcription start site region 36532
Gm11824 4 14170066 to 14170911 845 + pseudogene predicted gene 11824
Gm2560 4 14212012 to 14291309 79297 - lncRNA gene predicted gene 2560
1700120G11Rik 4 14219496 to 14237450 17954 - lincRNA gene RIKEN cDNA 1700120G11 gene
Gm24908 4 14239618 to 14239744 126 + snoRNA gene predicted gene, 24908
Tssr36533 4 14240198 to 14240209 11 + TSS region transcription start site region 36533
Tssr36534 4 14284434 to 14284435 1 + TSS region transcription start site region 36534
Tssr36535 4 14433842 to 14433848 6 + TSS region transcription start site region 36535
Gm11836 4 14433891 to 14434331 440 + pseudogene predicted gene 11836
Slc26a7 4 14502430 to 14621805 119375 - protein coding gene solute carrier family 26, member 7
Tssr40956 4 14516367 to 14516378 11 - TSS region transcription start site region 40956
2310046G18Rik 4 14525863 to 14526196 333 unclassified gene RIKEN cDNA 2310046G18 gene
Tssr40957 4 14544214 to 14544231 17 - TSS region transcription start site region 40957
Tssr40958 4 14621494 to 14621506 12 - TSS region transcription start site region 40958
Tssr40959 4 14621770 to 14621786 16 - TSS region transcription start site region 40959
Tssr40960 4 14621792 to 14621797 5 - TSS region transcription start site region 40960
Tssr40961 4 14621808 to 14621819 11 - TSS region transcription start site region 40961
Lrrc69 4 14623620 to 14796060 172440 - protein coding gene leucine rich repeat containing 69
Mvwf3 4 117215009 to 14010457 -103204552 QTL modifier of von Willebrand factor 3