Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:138077430-138217452

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif4g3 4 137993013 to 138207081 214068 + protein coding gene eukaryotic translation initiation factor 4 gamma, 3
Tssr39824 4 138096755 to 138096773 18 + TSS region transcription start site region 39824
Tssr39825 4 138096817 to 138096835 18 + TSS region transcription start site region 39825
Tssr39826 4 138097304 to 138097328 24 + TSS region transcription start site region 39826
Tssr39827 4 138126497 to 138126510 13 + TSS region transcription start site region 39827
1700095J12Rik 4 138137595 to 138138518 923 - antisense lncRNA gene RIKEN cDNA 1700095J12 gene
Tssr44156 4 138138459 to 138138478 19 - TSS region transcription start site region 44156
Tssr44157 4 138138490 to 138138495 5 - TSS region transcription start site region 44157
Tssr39828 4 138147415 to 138147420 5 + TSS region transcription start site region 39828
Tssr39829 4 138147430 to 138147452 22 + TSS region transcription start site region 39829
Tssr39830 4 138147467 to 138147468 1 + TSS region transcription start site region 39830
Mir6399 4 138163209 to 138163292 83 + miRNA gene microRNA 6399
Tssr39831 4 138172984 to 138172988 4 + TSS region transcription start site region 39831
Tssr39832 4 138175874 to 138175887 13 + TSS region transcription start site region 39832
Tssr39833 4 138206074 to 138206096 22 + TSS region transcription start site region 39833
Tssr39834 4 138206341 to 138206360 19 + TSS region transcription start site region 39834
2310026L22Rik 4 138215714 to 138216189 475 + lincRNA gene RIKEN cDNA 2310026L22 gene
Cpgi15143 4 138216129 to 138217890 1761 CpG island CpG island 15143
Tssr39835 4 138216299 to 138216324 25 + TSS region transcription start site region 39835
Tssr39836 4 138216411 to 138216464 53 + TSS region transcription start site region 39836
Tssr39837 4 138216465 to 138216503 38 + TSS region transcription start site region 39837
Hp1bp3 4 138216612 to 138244683 28071 + protein coding gene heterochromatin protein 1, binding protein 3
Tssr39838 4 138216624 to 138216650 26 + TSS region transcription start site region 39838
Tssr39839 4 138217120 to 138217203 83 + TSS region transcription start site region 39839
Tssr39840 4 138217235 to 138217310 75 + TSS region transcription start site region 39840