Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:137341008-137510520

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdc42 4 137319696 to 137357720 38024 - protein coding gene cell division cycle 42
Tssr44117 4 137344060 to 137344070 10 - TSS region transcription start site region 44117
Tssr44118 4 137345253 to 137345261 8 - TSS region transcription start site region 44118
2610020P09Rik 4 137350570 to 137352305 1735 unclassified gene RIKEN cDNA 2610020P09 gene
D4Ertd76e 4 137353926 to 137354175 249 DNA segment DNA segment, Chr 4, ERATO Doi 76, expressed
Tssr44119 4 137356310 to 137356318 8 - TSS region transcription start site region 44119
Cpgi15127 4 137356908 to 137358058 1150 CpG island CpG island 15127
Tssr44120 4 137357661 to 137357710 49 - TSS region transcription start site region 44120
Tssr44121 4 137357711 to 137357722 11 - TSS region transcription start site region 44121
2810405F17Rik 4 137387266 to 137388382 1116 - lincRNA gene RIKEN cDNA 2810405F17 gene
Cpgi15128 4 137387810 to 137388723 913 CpG island CpG island 15128
Tssr44122 4 137388135 to 137388167 32 - TSS region transcription start site region 44122
Tssr44123 4 137388371 to 137388430 59 - TSS region transcription start site region 44123
Tssr1346 4 137388694 to 137388704 10 + TSS region transcription start site region 1346
Rpl31-ps10 4 137395299 to 137395676 377 + pseudogene ribosomal protein L31, pseudogene 10
Cela3a 4 137401554 to 137409791 8237 - protein coding gene chymotrypsin-like elastase family, member 3A
Tssr44124 4 137409777 to 137409778 1 - TSS region transcription start site region 44124
Cela3b 4 137421008 to 137430520 9512 - protein coding gene chymotrypsin-like elastase family, member 3B
Tssr39743 4 137424778 to 137424797 19 + TSS region transcription start site region 39743
Tssr39744 4 137424859 to 137424870 11 + TSS region transcription start site region 39744
Tssr39745 4 137424875 to 137424889 14 + TSS region transcription start site region 39745
Tssr44125 4 137430517 to 137430525 8 - TSS region transcription start site region 44125
Gm13010 4 137436579 to 137438395 1816 - antisense lncRNA gene predicted gene 13010
Tssr44126 4 137437793 to 137437827 34 - TSS region transcription start site region 44126
Tssr39746 4 137453253 to 137453316 63 + TSS region transcription start site region 39746
1700013G24Rik 4 137453296 to 137455461 2165 + protein coding gene RIKEN cDNA 1700013G24 gene
Tssr39747 4 137453320 to 137453335 15 + TSS region transcription start site region 39747
Tssr39748 4 137454593 to 137454606 13 + TSS region transcription start site region 39748
Tssr39749 4 137454761 to 137454772 11 + TSS region transcription start site region 39749
Tssr39750 4 137454778 to 137454784 6 + TSS region transcription start site region 39750
Cpgi15129 4 137468226 to 137469358 1132 CpG island CpG island 15129
Tssr39751 4 137468767 to 137468831 64 + TSS region transcription start site region 39751
Hspg2 4 137468769 to 137570630 101861 + protein coding gene perlecan (heparan sulfate proteoglycan 2)
Tssr1347 4 137484694 to 137484697 3 + TSS region transcription start site region 1347
Tssr39752 4 137485163 to 137485174 11 + TSS region transcription start site region 39752
Tssr39753 4 137507246 to 137507250 4 + TSS region transcription start site region 39753