Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
ctl | 4 | 4463317 | heritable phenotypic marker | curly tail-like | ||
Psds2 | 4 | 4463317 | QTL | psoriasis-like skin disease severity 2 | ||
Tssr39738 | 4 | 4 | + | TSS region | transcription start site region 39738 | |
Cpgi15124 | 4 | 208 | CpG island | CpG island 15124 | ||
Ssrq8 | 4 | 741995 | QTL | stress response QTL 8 | ||
D4Mit148 | 4 | 127 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 148 | ||
Shm2 | 4 | 1466753 | QTL | sperm head morphology 2 | ||
Gm13003 | 4 | 5984 | - | lincRNA gene | predicted gene 13003 | |
Tssr44108 | 4 | 18 | - | TSS region | transcription start site region 44108 | |
Gm46872 | 4 | 6787 | - | lncRNA gene | predicted gene, 46872 | |
Gm25399 | 4 | 75 | + | miRNA gene | predicted gene, 25399 | |
Gm23263 | 4 | 75 | + | miRNA gene | predicted gene, 23263 | |
Gm31820 | 4 | 68680 | - | lncRNA gene | predicted gene, 31820 | |
Gm13005 | 4 | 639 | - | pseudogene | predicted gene 13005 | |
Gm13002 | 4 | 681 | - | pseudogene | predicted gene 13002 | |
Tssr44109 | 4 | 3 | - | TSS region | transcription start site region 44109 | |
D4Mit282 | 4 | 121 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 282 | ||
Cpgi15125 | 4 | 2172 | CpG island | CpG island 15125 | ||
Tssr1345 | 4 | 3 | + | TSS region | transcription start site region 1345 | |
Tssr39739 | 4 | 18 | + | TSS region | transcription start site region 39739 | |
Tssr39740 | 4 | 2 | + | TSS region | transcription start site region 39740 | |
Wnt4 | 4 | 21866 | + | protein coding gene | wingless-type MMTV integration site family, member 4 | |
Tssr44110 | 4 | 7 | - | TSS region | transcription start site region 44110 | |
Cpgi15126 | 4 | 229 | CpG island | CpG island 15126 | ||
Tssr39741 | 4 | 19 | + | TSS region | transcription start site region 39741 | |
Cdc42 | 4 | 38024 | - | protein coding gene | cell division cycle 42 | |
Tssr44111 | 4 | 16 | - | TSS region | transcription start site region 44111 | |
Tssr39742 | 4 | 24 | + | TSS region | transcription start site region 39742 | |
Tssr44112 | 4 | 53 | - | TSS region | transcription start site region 44112 | |
Tssr44113 | 4 | 22 | - | TSS region | transcription start site region 44113 | |
Gm25772 | 4 | 55 | + | snRNA gene | predicted gene, 25772 | |
Tssr44114 | 4 | 38 | - | TSS region | transcription start site region 44114 | |
Tssr44115 | 4 | 13 | - | TSS region | transcription start site region 44115 | |
A430061O12Rik | 4 | 3708 | unclassified gene | RIKEN cDNA A430061O12 gene | ||
Tssr44116 | 4 | 4 | - | TSS region | transcription start site region 44116 | |
Tssr44117 | 4 | 10 | - | TSS region | transcription start site region 44117 | |
Tssr44118 | 4 | 8 | - | TSS region | transcription start site region 44118 | |
2610020P09Rik | 4 | 1735 | unclassified gene | RIKEN cDNA 2610020P09 gene | ||
D4Ertd76e | 4 | 249 | DNA segment | DNA segment, Chr 4, ERATO Doi 76, expressed | ||
Tssr44119 | 4 | 8 | - | TSS region | transcription start site region 44119 | |
Cpgi15127 | 4 | 1150 | CpG island | CpG island 15127 | ||
Tssr44120 | 4 | 49 | - | TSS region | transcription start site region 44120 | |
Tssr44121 | 4 | 11 | - | TSS region | transcription start site region 44121 | |
2810405F17Rik | 4 | 1116 | - | lincRNA gene | RIKEN cDNA 2810405F17 gene | |
Cpgi15128 | 4 | 913 | CpG island | CpG island 15128 | ||
Tssr44122 | 4 | 32 | - | TSS region | transcription start site region 44122 | |
Tssr44123 | 4 | 59 | - | TSS region | transcription start site region 44123 | |
Tssr1346 | 4 | 10 | + | TSS region | transcription start site region 1346 | |
Rpl31-ps10 | 4 | 377 | + | pseudogene | ribosomal protein L31, pseudogene 10 | |
Cela3a | 4 | 8237 | - | protein coding gene | chymotrypsin-like elastase family, member 3A | |
Tssr44124 | 4 | 1 | - | TSS region | transcription start site region 44124 | |
Cela3b | 4 | 9512 | - | protein coding gene | chymotrypsin-like elastase family, member 3B | |
Tssr39743 | 4 | 19 | + | TSS region | transcription start site region 39743 | |
Tssr39744 | 4 | 11 | + | TSS region | transcription start site region 39744 | |
Tssr39745 | 4 | 14 | + | TSS region | transcription start site region 39745 | |
Tssr44125 | 4 | 8 | - | TSS region | transcription start site region 44125 | |
Gm13010 | 4 | 1816 | - | antisense lncRNA gene | predicted gene 13010 | |
Tssr44126 | 4 | 34 | - | TSS region | transcription start site region 44126 | |
Tssr39746 | 4 | 63 | + | TSS region | transcription start site region 39746 | |
1700013G24Rik | 4 | 2165 | + | protein coding gene | RIKEN cDNA 1700013G24 gene | |
Tssr39747 | 4 | 15 | + | TSS region | transcription start site region 39747 | |
Tssr39748 | 4 | 13 | + | TSS region | transcription start site region 39748 | |
Tssr39749 | 4 | 11 | + | TSS region | transcription start site region 39749 | |
Tssr39750 | 4 | 6 | + | TSS region | transcription start site region 39750 | |
Cpgi15129 | 4 | 1132 | CpG island | CpG island 15129 | ||
Tssr39751 | 4 | 64 | + | TSS region | transcription start site region 39751 | |
Hspg2 | 4 | 101861 | + | protein coding gene | perlecan (heparan sulfate proteoglycan 2) | |
Tssr1347 | 4 | 3 | + | TSS region | transcription start site region 1347 | |
Tssr39752 | 4 | 11 | + | TSS region | transcription start site region 39752 | |
Tssr39753 | 4 | 4 | + | TSS region | transcription start site region 39753 | |
Tssr1348 | 4 | 21 | + | TSS region | transcription start site region 1348 | |
Tssr39754 | 4 | 37 | + | TSS region | transcription start site region 39754 | |
Mir7018 | 4 | 84 | + | miRNA gene | microRNA 7018 | |
Cpgi15130 | 4 | 205 | CpG island | CpG island 15130 | ||
Tssr39755 | 4 | 2 | + | TSS region | transcription start site region 39755 | |
Tssr39756 | 4 | 9 | + | TSS region | transcription start site region 39756 | |
Tssr39757 | 4 | 21 | + | TSS region | transcription start site region 39757 | |
Tssr39758 | 4 | 14 | + | TSS region | transcription start site region 39758 | |
Tssr39759 | 4 | 20 | + | TSS region | transcription start site region 39759 | |
Ldlrad2 | 4 | 2486 | - | protein coding gene | low density lipoprotein receptor class A domain containing 2 | |
Cpgi15131 | 4 | 535 | CpG island | CpG island 15131 | ||
Cpgi15132 | 4 | 1650 | CpG island | CpG island 15132 | ||
Tssr44127 | 4 | 9 | - | TSS region | transcription start site region 44127 | |
Usp48 | 4 | 64388 | + | protein coding gene | ubiquitin specific peptidase 48 | |
Tssr39760 | 4 | 125 | + | TSS region | transcription start site region 39760 | |
Tssr39761 | 4 | 7 | + | TSS region | transcription start site region 39761 | |
Tssr44128 | 4 | 25 | - | TSS region | transcription start site region 44128 | |
Tssr39762 | 4 | 27 | + | TSS region | transcription start site region 39762 | |
Tssr44129 | 4 | 7 | - | TSS region | transcription start site region 44129 | |
Tssr39763 | 4 | 37 | + | TSS region | transcription start site region 39763 | |
Tssr39764 | 4 | 1 | + | TSS region | transcription start site region 39764 | |
Tssr39765 | 4 | 4 | + | TSS region | transcription start site region 39765 | |
Tssr39766 | 4 | 11 | + | TSS region | transcription start site region 39766 | |
Tssr39767 | 4 | 15 | + | TSS region | transcription start site region 39767 | |
Tssr39768 | 4 | 4 | + | TSS region | transcription start site region 39768 | |
Tssr39769 | 4 | 3 | + | TSS region | transcription start site region 39769 | |
Cpgi15133 | 4 | 1312 | CpG island | CpG island 15133 | ||
Tssr39770 | 4 | 80 | + | TSS region | transcription start site region 39770 | |
Rap1gap | 4 | 65135 | + | protein coding gene | Rap1 GTPase-activating protein | |
Tssr44130 | 4 | 4 | - | TSS region | transcription start site region 44130 | |
Cpgi15134 | 4 | 1391 | CpG island | CpG island 15134 | ||
Tssr39771 | 4 | 29 | + | TSS region | transcription start site region 39771 | |
Tssr39772 | 4 | 56 | + | TSS region | transcription start site region 39772 | |
Tssr1349 | 4 | 11 | + | TSS region | transcription start site region 1349 | |
Tssr39773 | 4 | 38 | + | TSS region | transcription start site region 39773 | |
Cpgi15135 | 4 | 172 | CpG island | CpG island 15135 | ||
Rap1gapos | 4 | 9627 | - | antisense lncRNA gene | RAP1 GTPase activating protein, opposite strand | |
Tssr44131 | 4 | 24 | - | TSS region | transcription start site region 44131 | |
Cpgi15136 | 4 | 1145 | CpG island | CpG island 15136 | ||
Tssr39774 | 4 | 69 | + | TSS region | transcription start site region 39774 | |
Tssr39775 | 4 | 18 | + | TSS region | transcription start site region 39775 | |
Tssr39776 | 4 | 25 | + | TSS region | transcription start site region 39776 | |
Tssr39777 | 4 | 17 | + | TSS region | transcription start site region 39777 | |
Tssr39778 | 4 | 9 | + | TSS region | transcription start site region 39778 | |
Tssr39779 | 4 | 9 | + | TSS region | transcription start site region 39779 | |
Tssr39780 | 4 | 3 | + | TSS region | transcription start site region 39780 | |
Tssr39781 | 4 | 40 | + | TSS region | transcription start site region 39781 | |
Tssr39782 | 4 | 29 | + | TSS region | transcription start site region 39782 | |
Cpgi15137 | 4 | 323 | CpG island | CpG island 15137 | ||
Cpgi15138 | 4 | 344 | CpG island | CpG island 15138 | ||
Alpl | 4 | 54651 | - | protein coding gene | alkaline phosphatase, liver/bone/kidney | |
Tssr44132 | 4 | 9 | - | TSS region | transcription start site region 44132 | |
Tssr44133 | 4 | 23 | - | TSS region | transcription start site region 44133 | |
Tssr44134 | 4 | 11 | - | TSS region | transcription start site region 44134 | |
Tssr44135 | 4 | 6 | - | TSS region | transcription start site region 44135 | |
Tssr44136 | 4 | 27 | - | TSS region | transcription start site region 44136 | |
Tssr44137 | 4 | 12 | - | TSS region | transcription start site region 44137 | |
Tssr44138 | 4 | 20 | - | TSS region | transcription start site region 44138 | |
Tssr44139 | 4 | 7 | - | TSS region | transcription start site region 44139 | |
Tssr44140 | 4 | 5 | - | TSS region | transcription start site region 44140 | |
Tssr44141 | 4 | 4 | - | TSS region | transcription start site region 44141 | |
Tssr44142 | 4 | 15 | - | TSS region | transcription start site region 44142 | |
Tssr44143 | 4 | 21 | - | TSS region | transcription start site region 44143 | |
Tssr44144 | 4 | 10 | - | TSS region | transcription start site region 44144 | |
Tssr44145 | 4 | 11 | - | TSS region | transcription start site region 44145 | |
Tssr44146 | 4 | 47 | - | TSS region | transcription start site region 44146 | |
Tssr44147 | 4 | 10 | - | TSS region | transcription start site region 44147 | |
Tssr44148 | 4 | 9 | - | TSS region | transcription start site region 44148 | |
Cpgi15139 | 4 | 1170 | CpG island | CpG island 15139 | ||
Tssr1350 | 4 | 11 | - | TSS region | transcription start site region 1350 | |
Tssr44149 | 4 | 17 | - | TSS region | transcription start site region 44149 | |
Tssr44150 | 4 | 11 | - | TSS region | transcription start site region 44150 | |
Gm32079 | 4 | 5706 | - | lncRNA gene | predicted gene, 32079 | |
Cpgi15140 | 4 | 1000 | CpG island | CpG island 15140 | ||
Tssr44151 | 4 | 20 | - | TSS region | transcription start site region 44151 | |
Ece1 | 4 | 102992 | + | protein coding gene | endothelin converting enzyme 1 | |
Tssr39783 | 4 | 11 | + | TSS region | transcription start site region 39783 | |
Tssr39784 | 4 | 16 | + | TSS region | transcription start site region 39784 | |
Tssr39785 | 4 | 51 | + | TSS region | transcription start site region 39785 | |
D4Mit67 | 4 | 137 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 67 | ||
Tssr44152 | 4 | 36 | - | TSS region | transcription start site region 44152 | |
Gm13012 | 4 | 1567 | - | antisense lncRNA gene | predicted gene 13012 | |
Tssr44153 | 4 | 50 | - | TSS region | transcription start site region 44153 | |
D4Mit54 | 4 | 147 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 54 | ||
Cypr6 | 4 | 147 | QTL | cytokine production 6 | ||
Athsq1 | 4 | 13679556 | QTL | atherosclerosis susceptibility QTL 1 | ||
Cinda3 | 4 | 4672365 | QTL | cytokine induced activation 3 | ||
Bntq18 | 4 | 147 | QTL | bone traits QTL 18 | ||
D4Dcr30 | 4 | 108 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 30 | ||
Tssr39786 | 4 | 5 | + | TSS region | transcription start site region 39786 | |
Tssr39787 | 4 | 12 | + | TSS region | transcription start site region 39787 | |
Tssr39788 | 4 | 10 | + | TSS region | transcription start site region 39788 | |
Tssr39789 | 4 | 9 | + | TSS region | transcription start site region 39789 | |
Tssr39790 | 4 | 36 | + | TSS region | transcription start site region 39790 | |
Cpgi15141 | 4 | 802 | CpG island | CpG island 15141 | ||
Tssr39791 | 4 | 52 | + | TSS region | transcription start site region 39791 | |
Tssr39792 | 4 | 17 | + | TSS region | transcription start site region 39792 | |
Tssr39793 | 4 | 31 | + | TSS region | transcription start site region 39793 | |
Tssr39794 | 4 | 17 | + | TSS region | transcription start site region 39794 | |
Tssr39795 | 4 | 13 | + | TSS region | transcription start site region 39795 | |
Tssr39796 | 4 | 48 | + | TSS region | transcription start site region 39796 | |
Tssr39797 | 4 | 15 | + | TSS region | transcription start site region 39797 | |
Tssr39798 | 4 | 32 | + | TSS region | transcription start site region 39798 | |
Tssr39799 | 4 | 5 | + | TSS region | transcription start site region 39799 | |
Tssr39800 | 4 | 6 | + | TSS region | transcription start site region 39800 | |
Tb2r1 | 4 | 12645707 | QTL | TGF-beta2 responsiveness 1 | ||
Sluc6 | 4 | 146 | QTL | susceptibility to lung cancer 6 | ||
Ssic1 | 4 | 146 | QTL | susceptibility to small intestinal cancer 1 | ||
D4Mit158 | 4 | 146 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 158 | ||
Tssr39801 | 4 | 14 | + | TSS region | transcription start site region 39801 | |
Tssr39802 | 4 | 66 | + | TSS region | transcription start site region 39802 | |
BE691133 | 4 | 1766 | unclassified gene | expressed sequence BE691133 | ||
Cpgi15142 | 4 | 1940 | CpG island | CpG island 15142 | ||
Eif4g3 | 4 | 214068 | + | protein coding gene | eukaryotic translation initiation factor 4 gamma, 3 | |
Tssr39803 | 4 | 20 | + | TSS region | transcription start site region 39803 | |
Tssr39804 | 4 | 35 | + | TSS region | transcription start site region 39804 | |
Tssr44154 | 4 | 20 | - | TSS region | transcription start site region 44154 | |
Tssr39805 | 4 | 29 | + | TSS region | transcription start site region 39805 | |
Tssr39806 | 4 | 26 | + | TSS region | transcription start site region 39806 | |
Tssr39807 | 4 | 52 | + | TSS region | transcription start site region 39807 | |
Tssr39808 | 4 | 13 | + | TSS region | transcription start site region 39808 | |
Tssr39809 | 4 | 75 | + | TSS region | transcription start site region 39809 | |
Gm32394 | 4 | 33752 | + | lncRNA gene | predicted gene, 32394 | |
Tssr44155 | 4 | 47 | - | TSS region | transcription start site region 44155 | |
Tssr39810 | 4 | 46 | + | TSS region | transcription start site region 39810 | |
Tssr39811 | 4 | 9 | + | TSS region | transcription start site region 39811 | |
8030494B02Rik | 4 | 4379 | unclassified non-coding RNA gene | Riken cDNA 8030494B02 gene | ||
Tssr39812 | 4 | 4 | + | TSS region | transcription start site region 39812 | |
Tssr39813 | 4 | 31 | + | TSS region | transcription start site region 39813 | |
Tssr39814 | 4 | 8 | + | TSS region | transcription start site region 39814 |