Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Tlsr3 | 4 | 7565207 | QTL | thymic lymphoma suppressor region 3 | ||
Epha8 | 4 | 27397 | - | protein coding gene | Eph receptor A8 | |
Tssr1344 | 4 | 2 | + | TSS region | transcription start site region 1344 | |
Tssr39731 | 4 | 3 | + | TSS region | transcription start site region 39731 | |
Tssr39732 | 4 | 10 | + | TSS region | transcription start site region 39732 | |
Tssr39733 | 4 | 26 | + | TSS region | transcription start site region 39733 | |
Tssr39734 | 4 | 15 | + | TSS region | transcription start site region 39734 | |
Tssr39735 | 4 | 5 | + | TSS region | transcription start site region 39735 | |
Tssr39736 | 4 | 6 | + | TSS region | transcription start site region 39736 | |
Cpgi15121 | 4 | 1564 | CpG island | CpG island 15121 | ||
Tssr44103 | 4 | 7 | - | TSS region | transcription start site region 44103 | |
Tssr44104 | 4 | 87 | - | TSS region | transcription start site region 44104 | |
Zbtb40 | 4 | 69069 | - | protein coding gene | zinc finger and BTB domain containing 40 | |
Tssr44105 | 4 | 4 | - | TSS region | transcription start site region 44105 | |
Gm23834 | 4 | 128 | + | snoRNA gene | predicted gene, 23834 | |
Cpgi15122 | 4 | 1177 | CpG island | CpG island 15122 | ||
Tssr44106 | 4 | 30 | - | TSS region | transcription start site region 44106 | |
Gm31648 | 4 | 18506 | + | lncRNA gene | predicted gene, 31648 | |
1700037C06Rik | 4 | 873 | - | lincRNA gene | RIKEN cDNA 1700037C06 gene | |
Gm13001 | 4 | 1000 | - | lincRNA gene | predicted gene 13001 | |
Cpgi15123 | 4 | 225 | CpG island | CpG island 15123 | ||
Tssr44107 | 4 | 30 | - | TSS region | transcription start site region 44107 | |
Tssr39737 | 4 | 4 | + | TSS region | transcription start site region 39737 | |
D4Mit68 | 4 | 103 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 68 | ||
Bis1 | 4 | 103 | QTL | beta-carboline-induced seizures 1 | ||
Bw8q2 | 4 | 103 | QTL | body weight at 8 weeks QTL 2 | ||
Gm31762 | 4 | 2962 | - | lncRNA gene | predicted gene, 31762 | |
Tssr39738 | 4 | 4 | + | TSS region | transcription start site region 39738 | |
Cpgi15124 | 4 | 208 | CpG island | CpG island 15124 | ||
D4Mit148 | 4 | 127 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 148 | ||
Shm2 | 4 | 1466753 | QTL | sperm head morphology 2 | ||
Ssrq8 | 4 | 741995 | QTL | stress response QTL 8 | ||
Gm13003 | 4 | 5984 | - | lincRNA gene | predicted gene 13003 | |
Tssr44108 | 4 | 18 | - | TSS region | transcription start site region 44108 | |
Gm46872 | 4 | 6787 | - | lncRNA gene | predicted gene, 46872 | |
Gm25399 | 4 | 75 | + | miRNA gene | predicted gene, 25399 | |
Gm23263 | 4 | 75 | + | miRNA gene | predicted gene, 23263 | |
Gm31820 | 4 | 68680 | - | lncRNA gene | predicted gene, 31820 | |
Gm13005 | 4 | 639 | - | pseudogene | predicted gene 13005 | |
Gm13002 | 4 | 681 | - | pseudogene | predicted gene 13002 | |
Tssr44109 | 4 | 3 | - | TSS region | transcription start site region 44109 | |
D4Mit282 | 4 | 121 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 282 | ||
Cpgi15125 | 4 | 2172 | CpG island | CpG island 15125 | ||
Tssr1345 | 4 | 3 | + | TSS region | transcription start site region 1345 | |
Tssr39739 | 4 | 18 | + | TSS region | transcription start site region 39739 | |
Tssr39740 | 4 | 2 | + | TSS region | transcription start site region 39740 | |
Wnt4 | 4 | 21866 | + | protein coding gene | wingless-type MMTV integration site family, member 4 | |
Tssr44110 | 4 | 7 | - | TSS region | transcription start site region 44110 | |
Cpgi15126 | 4 | 229 | CpG island | CpG island 15126 | ||
Tssr39741 | 4 | 19 | + | TSS region | transcription start site region 39741 | |
Cdc42 | 4 | 38024 | - | protein coding gene | cell division cycle 42 | |
Tssr44111 | 4 | 16 | - | TSS region | transcription start site region 44111 | |
Tssr39742 | 4 | 24 | + | TSS region | transcription start site region 39742 | |
Tssr44112 | 4 | 53 | - | TSS region | transcription start site region 44112 | |
Tssr44113 | 4 | 22 | - | TSS region | transcription start site region 44113 | |
Gm25772 | 4 | 55 | + | snRNA gene | predicted gene, 25772 | |
Tssr44114 | 4 | 38 | - | TSS region | transcription start site region 44114 | |
Tssr44115 | 4 | 13 | - | TSS region | transcription start site region 44115 | |
A430061O12Rik | 4 | 3708 | unclassified gene | RIKEN cDNA A430061O12 gene | ||
Tssr44116 | 4 | 4 | - | TSS region | transcription start site region 44116 | |
Tssr44117 | 4 | 10 | - | TSS region | transcription start site region 44117 | |
Tssr44118 | 4 | 8 | - | TSS region | transcription start site region 44118 | |
2610020P09Rik | 4 | 1735 | unclassified gene | RIKEN cDNA 2610020P09 gene | ||
D4Ertd76e | 4 | 249 | DNA segment | DNA segment, Chr 4, ERATO Doi 76, expressed | ||
Tssr44119 | 4 | 8 | - | TSS region | transcription start site region 44119 | |
Cpgi15127 | 4 | 1150 | CpG island | CpG island 15127 | ||
Tssr44120 | 4 | 49 | - | TSS region | transcription start site region 44120 | |
Tssr44121 | 4 | 11 | - | TSS region | transcription start site region 44121 | |
2810405F17Rik | 4 | 1116 | - | lincRNA gene | RIKEN cDNA 2810405F17 gene | |
Cpgi15128 | 4 | 913 | CpG island | CpG island 15128 | ||
Tssr44122 | 4 | 32 | - | TSS region | transcription start site region 44122 | |
Tssr44123 | 4 | 59 | - | TSS region | transcription start site region 44123 | |
Tssr1346 | 4 | 10 | + | TSS region | transcription start site region 1346 | |
Rpl31-ps10 | 4 | 377 | + | pseudogene | ribosomal protein L31, pseudogene 10 | |
Cela3a | 4 | 8237 | - | protein coding gene | chymotrypsin-like elastase family, member 3A | |
Tssr44124 | 4 | 1 | - | TSS region | transcription start site region 44124 | |
Cela3b | 4 | 9512 | - | protein coding gene | chymotrypsin-like elastase family, member 3B | |
Tssr39743 | 4 | 19 | + | TSS region | transcription start site region 39743 | |
Tssr39744 | 4 | 11 | + | TSS region | transcription start site region 39744 | |
Tssr39745 | 4 | 14 | + | TSS region | transcription start site region 39745 | |
Tssr44125 | 4 | 8 | - | TSS region | transcription start site region 44125 | |
Gm13010 | 4 | 1816 | - | antisense lncRNA gene | predicted gene 13010 | |
Tssr44126 | 4 | 34 | - | TSS region | transcription start site region 44126 | |
Tssr39746 | 4 | 63 | + | TSS region | transcription start site region 39746 | |
1700013G24Rik | 4 | 2165 | + | protein coding gene | RIKEN cDNA 1700013G24 gene | |
Tssr39747 | 4 | 15 | + | TSS region | transcription start site region 39747 | |
Tssr39748 | 4 | 13 | + | TSS region | transcription start site region 39748 | |
Tssr39749 | 4 | 11 | + | TSS region | transcription start site region 39749 | |
Tssr39750 | 4 | 6 | + | TSS region | transcription start site region 39750 | |
Cpgi15129 | 4 | 1132 | CpG island | CpG island 15129 | ||
Tssr39751 | 4 | 64 | + | TSS region | transcription start site region 39751 | |
Hspg2 | 4 | 101861 | + | protein coding gene | perlecan (heparan sulfate proteoglycan 2) | |
Tssr1347 | 4 | 3 | + | TSS region | transcription start site region 1347 | |
Tssr39752 | 4 | 11 | + | TSS region | transcription start site region 39752 | |
Tssr39753 | 4 | 4 | + | TSS region | transcription start site region 39753 | |
Tssr1348 | 4 | 21 | + | TSS region | transcription start site region 1348 | |
Tssr39754 | 4 | 37 | + | TSS region | transcription start site region 39754 | |
Mir7018 | 4 | 84 | + | miRNA gene | microRNA 7018 | |
Cpgi15130 | 4 | 205 | CpG island | CpG island 15130 | ||
Tssr39755 | 4 | 2 | + | TSS region | transcription start site region 39755 | |
Tssr39756 | 4 | 9 | + | TSS region | transcription start site region 39756 | |
Tssr39757 | 4 | 21 | + | TSS region | transcription start site region 39757 | |
Tssr39758 | 4 | 14 | + | TSS region | transcription start site region 39758 | |
Tssr39759 | 4 | 20 | + | TSS region | transcription start site region 39759 | |
Ldlrad2 | 4 | 2486 | - | protein coding gene | low density lipoprotein receptor class A domain containing 2 | |
Cpgi15131 | 4 | 535 | CpG island | CpG island 15131 | ||
Cpgi15132 | 4 | 1650 | CpG island | CpG island 15132 | ||
Tssr44127 | 4 | 9 | - | TSS region | transcription start site region 44127 | |
Usp48 | 4 | 64388 | + | protein coding gene | ubiquitin specific peptidase 48 | |
Tssr39760 | 4 | 125 | + | TSS region | transcription start site region 39760 | |
Tssr39761 | 4 | 7 | + | TSS region | transcription start site region 39761 | |
Tssr44128 | 4 | 25 | - | TSS region | transcription start site region 44128 | |
Tssr39762 | 4 | 27 | + | TSS region | transcription start site region 39762 | |
Tssr44129 | 4 | 7 | - | TSS region | transcription start site region 44129 | |
Tssr39763 | 4 | 37 | + | TSS region | transcription start site region 39763 | |
Tssr39764 | 4 | 1 | + | TSS region | transcription start site region 39764 | |
Tssr39765 | 4 | 4 | + | TSS region | transcription start site region 39765 | |
Tssr39766 | 4 | 11 | + | TSS region | transcription start site region 39766 | |
Tssr39767 | 4 | 15 | + | TSS region | transcription start site region 39767 | |
Tssr39768 | 4 | 4 | + | TSS region | transcription start site region 39768 | |
Tssr39769 | 4 | 3 | + | TSS region | transcription start site region 39769 | |
Cpgi15133 | 4 | 1312 | CpG island | CpG island 15133 | ||
Tssr39770 | 4 | 80 | + | TSS region | transcription start site region 39770 | |
Rap1gap | 4 | 65135 | + | protein coding gene | Rap1 GTPase-activating protein | |
Tssr44130 | 4 | 4 | - | TSS region | transcription start site region 44130 | |
Cpgi15134 | 4 | 1391 | CpG island | CpG island 15134 | ||
Tssr39771 | 4 | 29 | + | TSS region | transcription start site region 39771 | |
Tssr39772 | 4 | 56 | + | TSS region | transcription start site region 39772 | |
Tssr1349 | 4 | 11 | + | TSS region | transcription start site region 1349 | |
Tssr39773 | 4 | 38 | + | TSS region | transcription start site region 39773 | |
Cpgi15135 | 4 | 172 | CpG island | CpG island 15135 | ||
Rap1gapos | 4 | 9627 | - | antisense lncRNA gene | RAP1 GTPase activating protein, opposite strand | |
Tssr44131 | 4 | 24 | - | TSS region | transcription start site region 44131 | |
Cpgi15136 | 4 | 1145 | CpG island | CpG island 15136 | ||
Tssr39774 | 4 | 69 | + | TSS region | transcription start site region 39774 | |
Tssr39775 | 4 | 18 | + | TSS region | transcription start site region 39775 | |
Tssr39776 | 4 | 25 | + | TSS region | transcription start site region 39776 | |
Tssr39777 | 4 | 17 | + | TSS region | transcription start site region 39777 | |
Tssr39778 | 4 | 9 | + | TSS region | transcription start site region 39778 | |
Tssr39779 | 4 | 9 | + | TSS region | transcription start site region 39779 | |
Tssr39780 | 4 | 3 | + | TSS region | transcription start site region 39780 | |
Tssr39781 | 4 | 40 | + | TSS region | transcription start site region 39781 | |
Tssr39782 | 4 | 29 | + | TSS region | transcription start site region 39782 | |
Cpgi15137 | 4 | 323 | CpG island | CpG island 15137 | ||
Cpgi15138 | 4 | 344 | CpG island | CpG island 15138 | ||
Alpl | 4 | 54651 | - | protein coding gene | alkaline phosphatase, liver/bone/kidney | |
Tssr44132 | 4 | 9 | - | TSS region | transcription start site region 44132 | |
Tssr44133 | 4 | 23 | - | TSS region | transcription start site region 44133 | |
Tssr44134 | 4 | 11 | - | TSS region | transcription start site region 44134 | |
Tssr44135 | 4 | 6 | - | TSS region | transcription start site region 44135 | |
Tssr44136 | 4 | 27 | - | TSS region | transcription start site region 44136 |