Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:136894732-137133801

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C1qa 4 136895917 to 136898803 2886 - protein coding gene complement component 1, q subcomponent, alpha polypeptide
Cpgi15120 4 136896092 to 136896289 197 CpG island CpG island 15120
Tssr44091 4 136896138 to 136896152 14 - TSS region transcription start site region 44091
Tssr44092 4 136896161 to 136896185 24 - TSS region transcription start site region 44092
Tssr44093 4 136896190 to 136896207 17 - TSS region transcription start site region 44093
Tssr44094 4 136896279 to 136896283 4 - TSS region transcription start site region 44094
Tssr44095 4 136896343 to 136896354 11 - TSS region transcription start site region 44095
Tssr44096 4 136896375 to 136896387 12 - TSS region transcription start site region 44096
Tssr44097 4 136896415 to 136896429 14 - TSS region transcription start site region 44097
Tssr44098 4 136898232 to 136898257 25 - TSS region transcription start site region 44098
Tssr44099 4 136898762 to 136898792 30 - TSS region transcription start site region 44099
Tssr44100 4 136898810 to 136898823 13 - TSS region transcription start site region 44100
Tssr44101 4 136898826 to 136898838 12 - TSS region transcription start site region 44101
Tssr44102 4 136898840 to 136898850 10 - TSS region transcription start site region 44102
Tssr39729 4 136909835 to 136909850 15 + TSS region transcription start site region 39729
Tssr39730 4 136909851 to 136909858 7 + TSS region transcription start site region 39730
D4Mit251 4 136927196 to 136927309 113 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 251
Epha8 4 136929419 to 136956816 27397 - protein coding gene Eph receptor A8
Tssr1344 4 136943212 to 136943214 2 + TSS region transcription start site region 1344
Tssr39731 4 136945615 to 136945618 3 + TSS region transcription start site region 39731
Tssr39732 4 136945624 to 136945634 10 + TSS region transcription start site region 39732
Tssr39733 4 136945640 to 136945666 26 + TSS region transcription start site region 39733
Tssr39734 4 136945679 to 136945694 15 + TSS region transcription start site region 39734
Tssr39735 4 136945701 to 136945706 5 + TSS region transcription start site region 39735
Tssr39736 4 136953025 to 136953031 6 + TSS region transcription start site region 39736
Cpgi15121 4 136956086 to 136957650 1564 CpG island CpG island 15121
Tssr44103 4 136956571 to 136956578 7 - TSS region transcription start site region 44103
Tssr44104 4 136956784 to 136956871 87 - TSS region transcription start site region 44104
Zbtb40 4 136979732 to 137048801 69069 - protein coding gene zinc finger and BTB domain containing 40
Tssr44105 4 137015129 to 137015133 4 - TSS region transcription start site region 44105
Gm23834 4 137025684 to 137025812 128 + snoRNA gene predicted gene, 23834
Cpgi15122 4 137047860 to 137049037 1177 CpG island CpG island 15122
Tssr44106 4 137048777 to 137048807 30 - TSS region transcription start site region 44106
Gm31648 4 137076595 to 137095101 18506 + lncRNA gene predicted gene, 31648
1700037C06Rik 4 137116709 to 137117582 873 - lincRNA gene RIKEN cDNA 1700037C06 gene
Gm13001 4 137117143 to 137118143 1000 - lincRNA gene predicted gene 13001
Cpgi15123 4 137118050 to 137118275 225 CpG island CpG island 15123
Tssr44107 4 137118135 to 137118165 30 - TSS region transcription start site region 44107
Tssr39737 4 137129376 to 137129380 4 + TSS region transcription start site region 39737