Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:136655624-137235634

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123 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tlsr3 4 129572018 to 137137225 7565207 QTL thymic lymphoma suppressor region 3
Ephb2 4 136647539 to 136835988 188449 - protein coding gene Eph receptor B2
Bllact2 4 136674649 to 136674649 0 QTL base line locomotor activity 2
Tssr44043 4 136676137 to 136676140 3 - TSS region transcription start site region 44043
Tssr44044 4 136687990 to 136687999 9 - TSS region transcription start site region 44044
Tssr44045 4 136688008 to 136688019 11 - TSS region transcription start site region 44045
Tssr44046 4 136688036 to 136688043 7 - TSS region transcription start site region 44046
Tssr44047 4 136695615 to 136695628 13 - TSS region transcription start site region 44047
Tssr44048 4 136738170 to 136738174 4 - TSS region transcription start site region 44048
Cpgi15116 4 136755462 to 136755871 409 CpG island CpG island 15116
Cpgi15117 4 136770872 to 136771659 787 CpG island CpG island 15117
Cpgi15118 4 136782043 to 136782246 203 CpG island CpG island 15118
Tssr44049 4 136785790 to 136785791 1 - TSS region transcription start site region 44049
Tssr39720 4 136802144 to 136802159 15 + TSS region transcription start site region 39720
Tssr44050 4 136819533 to 136819548 15 - TSS region transcription start site region 44050
Tssr44051 4 136819667 to 136819684 17 - TSS region transcription start site region 44051
Cpgi15119 4 136834807 to 136836838 2031 CpG island CpG island 15119
Tssr44052 4 136835967 to 136835982 15 - TSS region transcription start site region 44052
Gm31536 4 136836026 to 136842074 6048 + lncRNA gene predicted gene, 31536
C1qb 4 136880145 to 136886177 6032 - protein coding gene complement component 1, q subcomponent, beta polypeptide
Tssr44053 4 136880273 to 136880285 12 - TSS region transcription start site region 44053
Tssr44054 4 136880332 to 136880343 11 - TSS region transcription start site region 44054
Tssr44055 4 136880344 to 136880353 9 - TSS region transcription start site region 44055
Tssr44056 4 136880379 to 136880397 18 - TSS region transcription start site region 44056
Tssr39721 4 136880404 to 136880417 13 + TSS region transcription start site region 39721
Tssr44057 4 136880408 to 136880422 14 - TSS region transcription start site region 44057
Tssr39722 4 136880495 to 136880554 59 + TSS region transcription start site region 39722
Tssr44058 4 136880517 to 136880529 12 - TSS region transcription start site region 44058
Tssr44059 4 136880553 to 136880569 16 - TSS region transcription start site region 44059
Tssr39723 4 136880561 to 136880613 52 + TSS region transcription start site region 39723
Tssr44060 4 136880575 to 136880594 19 - TSS region transcription start site region 44060
Tssr44061 4 136880698 to 136880728 30 - TSS region transcription start site region 44061
Tssr44062 4 136880734 to 136880743 9 - TSS region transcription start site region 44062
Tssr44063 4 136880762 to 136880773 11 - TSS region transcription start site region 44063
Tssr44064 4 136880780 to 136880800 20 - TSS region transcription start site region 44064
Tssr44065 4 136882201 to 136882238 37 - TSS region transcription start site region 44065
Tssr44066 4 136882281 to 136882296 15 - TSS region transcription start site region 44066
Tssr44067 4 136886071 to 136886110 39 - TSS region transcription start site region 44067
Tssr44068 4 136886111 to 136886155 44 - TSS region transcription start site region 44068
Tssr44069 4 136886162 to 136886175 13 - TSS region transcription start site region 44069
Tssr44070 4 136886181 to 136886183 2 - TSS region transcription start site region 44070
Tssr44071 4 136886189 to 136886200 11 - TSS region transcription start site region 44071
C1qc 4 136889802 to 136892932 3130 - protein coding gene complement component 1, q subcomponent, C chain
Tssr39724 4 136889804 to 136889815 11 + TSS region transcription start site region 39724
Tssr39725 4 136889964 to 136889988 24 + TSS region transcription start site region 39725
Tssr44072 4 136889999 to 136890042 43 - TSS region transcription start site region 44072
Tssr39726 4 136890001 to 136890113 112 + TSS region transcription start site region 39726
Tssr44073 4 136890056 to 136890063 7 - TSS region transcription start site region 44073
Tssr44074 4 136890088 to 136890099 11 - TSS region transcription start site region 44074
Tssr44075 4 136890133 to 136890144 11 - TSS region transcription start site region 44075
Tssr44076 4 136890157 to 136890162 5 - TSS region transcription start site region 44076
Tssr44077 4 136890250 to 136890255 5 - TSS region transcription start site region 44077
Tssr44078 4 136890283 to 136890294 11 - TSS region transcription start site region 44078
Tssr44079 4 136890303 to 136890315 12 - TSS region transcription start site region 44079
Tssr39727 4 136890323 to 136890355 32 + TSS region transcription start site region 39727
Tssr44080 4 136890326 to 136890343 17 - TSS region transcription start site region 44080
Tssr44081 4 136890354 to 136890365 11 - TSS region transcription start site region 44081
Tssr39728 4 136890358 to 136890403 45 + TSS region transcription start site region 39728
Tssr44082 4 136890371 to 136890384 13 - TSS region transcription start site region 44082
Tssr44083 4 136890417 to 136890422 5 - TSS region transcription start site region 44083
Tssr44084 4 136890439 to 136890448 9 - TSS region transcription start site region 44084
Tssr44085 4 136890504 to 136890507 3 - TSS region transcription start site region 44085
Tssr44086 4 136892485 to 136892593 108 - TSS region transcription start site region 44086
Tssr44087 4 136892850 to 136892854 4 - TSS region transcription start site region 44087
Tssr44088 4 136892861 to 136892864 3 - TSS region transcription start site region 44088
Tssr44089 4 136892867 to 136892937 70 - TSS region transcription start site region 44089
Tssr44090 4 136893092 to 136893098 6 - TSS region transcription start site region 44090
C1qa 4 136895917 to 136898803 2886 - protein coding gene complement component 1, q subcomponent, alpha polypeptide
Cpgi15120 4 136896092 to 136896289 197 CpG island CpG island 15120
Tssr44091 4 136896138 to 136896152 14 - TSS region transcription start site region 44091
Tssr44092 4 136896161 to 136896185 24 - TSS region transcription start site region 44092
Tssr44093 4 136896190 to 136896207 17 - TSS region transcription start site region 44093
Tssr44094 4 136896279 to 136896283 4 - TSS region transcription start site region 44094
Tssr44095 4 136896343 to 136896354 11 - TSS region transcription start site region 44095
Tssr44096 4 136896375 to 136896387 12 - TSS region transcription start site region 44096
Tssr44097 4 136896415 to 136896429 14 - TSS region transcription start site region 44097
Tssr44098 4 136898232 to 136898257 25 - TSS region transcription start site region 44098
Tssr44099 4 136898762 to 136898792 30 - TSS region transcription start site region 44099
Tssr44100 4 136898810 to 136898823 13 - TSS region transcription start site region 44100
Tssr44101 4 136898826 to 136898838 12 - TSS region transcription start site region 44101
Tssr44102 4 136898840 to 136898850 10 - TSS region transcription start site region 44102
Tssr39729 4 136909835 to 136909850 15 + TSS region transcription start site region 39729
Tssr39730 4 136909851 to 136909858 7 + TSS region transcription start site region 39730
D4Mit251 4 136927196 to 136927309 113 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 251
Epha8 4 136929419 to 136956816 27397 - protein coding gene Eph receptor A8
Tssr1344 4 136943212 to 136943214 2 + TSS region transcription start site region 1344
Tssr39731 4 136945615 to 136945618 3 + TSS region transcription start site region 39731
Tssr39732 4 136945624 to 136945634 10 + TSS region transcription start site region 39732
Tssr39733 4 136945640 to 136945666 26 + TSS region transcription start site region 39733
Tssr39734 4 136945679 to 136945694 15 + TSS region transcription start site region 39734
Tssr39735 4 136945701 to 136945706 5 + TSS region transcription start site region 39735
Tssr39736 4 136953025 to 136953031 6 + TSS region transcription start site region 39736
Cpgi15121 4 136956086 to 136957650 1564 CpG island CpG island 15121
Tssr44103 4 136956571 to 136956578 7 - TSS region transcription start site region 44103
Tssr44104 4 136956784 to 136956871 87 - TSS region transcription start site region 44104
Zbtb40 4 136979732 to 137048801 69069 - protein coding gene zinc finger and BTB domain containing 40
Tssr44105 4 137015129 to 137015133 4 - TSS region transcription start site region 44105
Gm23834 4 137025684 to 137025812 128 + snoRNA gene predicted gene, 23834
Cpgi15122 4 137047860 to 137049037 1177 CpG island CpG island 15122
Tssr44106 4 137048777 to 137048807 30 - TSS region transcription start site region 44106
Gm31648 4 137076595 to 137095101 18506 + lncRNA gene predicted gene, 31648
1700037C06Rik 4 137116709 to 137117582 873 - lincRNA gene RIKEN cDNA 1700037C06 gene
Gm13001 4 137117143 to 137118143 1000 - lincRNA gene predicted gene 13001
Cpgi15123 4 137118050 to 137118275 225 CpG island CpG island 15123
Tssr44107 4 137118135 to 137118165 30 - TSS region transcription start site region 44107
Tssr39737 4 137129376 to 137129380 4 + TSS region transcription start site region 39737
D4Mit68 4 137137122 to 137137225 103 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 68
Bw8q2 4 137137122 to 137137225 103 QTL body weight at 8 weeks QTL 2
Bis1 4 137137122 to 137137225 103 QTL beta-carboline-induced seizures 1
Gm31762 4 137139496 to 137142458 2962 - lncRNA gene predicted gene, 31762
Tssr39738 4 137146698 to 137146702 4 + TSS region transcription start site region 39738
Cpgi15124 4 137147965 to 137148173 208 CpG island CpG island 15124
Shm2 4 137148689 to 138615442 1466753 QTL sperm head morphology 2
D4Mit148 4 137148689 to 137148816 127 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 148
Ssrq8 4 137148689 to 137890684 741995 QTL stress response QTL 8
Gm13003 4 137159082 to 137165066 5984 - lincRNA gene predicted gene 13003
Tssr44108 4 137166823 to 137166841 18 - TSS region transcription start site region 44108
Gm46872 4 137171297 to 137178084 6787 - lncRNA gene predicted gene, 46872
Gm25399 4 137183987 to 137184062 75 + miRNA gene predicted gene, 25399
Gm23263 4 137184065 to 137184140 75 + miRNA gene predicted gene, 23263
Gm31820 4 137184081 to 137252761 68680 - lncRNA gene predicted gene, 31820
Gm13005 4 137219760 to 137220399 639 - pseudogene predicted gene 13005
Gm13002 4 137222641 to 137223322 681 - pseudogene predicted gene 13002