Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:136600462-136910871

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kdm1a 4 136550540 to 136602723 52183 - protein coding gene lysine (K)-specific demethylase 1A
Cpgi15114 4 136601910 to 136603033 1123 CpG island CpG island 15114
Tssr44038 4 136602577 to 136602602 25 - TSS region transcription start site region 44038
Tssr44039 4 136602609 to 136602616 7 - TSS region transcription start site region 44039
Tssr44040 4 136602619 to 136602634 15 - TSS region transcription start site region 44040
Tssr44041 4 136602641 to 136602760 119 - TSS region transcription start site region 44041
Tssr44042 4 136602776 to 136602798 22 - TSS region transcription start site region 44042
Gm12986 4 136608840 to 136609806 966 - pseudogene predicted gene 12986
Gm22180 4 136609806 to 136609864 58 - miRNA gene predicted gene, 22180
Tssr39715 4 136610431 to 136610451 20 + TSS region transcription start site region 39715
Tex46 4 136610437 to 136613226 2789 + protein coding gene testis expressed 46
Tssr39716 4 136622612 to 136622621 9 + TSS region transcription start site region 39716
Lactbl1 4 136622621 to 136639110 16489 + protein coding gene lactamase, beta-like 1
Tssr39717 4 136622631 to 136622652 21 + TSS region transcription start site region 39717
Cpgi15115 4 136637020 to 136638456 1436 CpG island CpG island 15115
Gm37583 4 136639582 to 136642068 2486 + unclassified gene predicted gene, 37583
Tssr39718 4 136640048 to 136640051 3 + TSS region transcription start site region 39718
Ephb2 4 136647539 to 136835988 188449 - protein coding gene Eph receptor B2
Tssr39719 4 136653232 to 136653243 11 + TSS region transcription start site region 39719
Bllact2 4 136674649 to 136674649 0 QTL base line locomotor activity 2
Tssr44043 4 136676137 to 136676140 3 - TSS region transcription start site region 44043
Tssr44044 4 136687990 to 136687999 9 - TSS region transcription start site region 44044
Tssr44045 4 136688008 to 136688019 11 - TSS region transcription start site region 44045
Tssr44046 4 136688036 to 136688043 7 - TSS region transcription start site region 44046
Tssr44047 4 136695615 to 136695628 13 - TSS region transcription start site region 44047
Tssr44048 4 136738170 to 136738174 4 - TSS region transcription start site region 44048
Cpgi15116 4 136755462 to 136755871 409 CpG island CpG island 15116
Cpgi15117 4 136770872 to 136771659 787 CpG island CpG island 15117
Cpgi15118 4 136782043 to 136782246 203 CpG island CpG island 15118
Tssr44049 4 136785790 to 136785791 1 - TSS region transcription start site region 44049
Tssr39720 4 136802144 to 136802159 15 + TSS region transcription start site region 39720
Tssr44050 4 136819533 to 136819548 15 - TSS region transcription start site region 44050
Tssr44051 4 136819667 to 136819684 17 - TSS region transcription start site region 44051
Cpgi15119 4 136834807 to 136836838 2031 CpG island CpG island 15119
Tssr44052 4 136835967 to 136835982 15 - TSS region transcription start site region 44052
Gm31536 4 136836026 to 136842074 6048 + lncRNA gene predicted gene, 31536
C1qb 4 136880145 to 136886177 6032 - protein coding gene complement component 1, q subcomponent, beta polypeptide
Tssr44053 4 136880273 to 136880285 12 - TSS region transcription start site region 44053
Tssr44054 4 136880332 to 136880343 11 - TSS region transcription start site region 44054
Tssr44055 4 136880344 to 136880353 9 - TSS region transcription start site region 44055
Tssr44056 4 136880379 to 136880397 18 - TSS region transcription start site region 44056
Tssr39721 4 136880404 to 136880417 13 + TSS region transcription start site region 39721
Tssr44057 4 136880408 to 136880422 14 - TSS region transcription start site region 44057
Tssr39722 4 136880495 to 136880554 59 + TSS region transcription start site region 39722
Tssr44058 4 136880517 to 136880529 12 - TSS region transcription start site region 44058
Tssr44059 4 136880553 to 136880569 16 - TSS region transcription start site region 44059
Tssr39723 4 136880561 to 136880613 52 + TSS region transcription start site region 39723
Tssr44060 4 136880575 to 136880594 19 - TSS region transcription start site region 44060
Tssr44061 4 136880698 to 136880728 30 - TSS region transcription start site region 44061
Tssr44062 4 136880734 to 136880743 9 - TSS region transcription start site region 44062
Tssr44063 4 136880762 to 136880773 11 - TSS region transcription start site region 44063
Tssr44064 4 136880780 to 136880800 20 - TSS region transcription start site region 44064
Tssr44065 4 136882201 to 136882238 37 - TSS region transcription start site region 44065
Tssr44066 4 136882281 to 136882296 15 - TSS region transcription start site region 44066
Tssr44067 4 136886071 to 136886110 39 - TSS region transcription start site region 44067
Tssr44068 4 136886111 to 136886155 44 - TSS region transcription start site region 44068
Tssr44069 4 136886162 to 136886175 13 - TSS region transcription start site region 44069
Tssr44070 4 136886181 to 136886183 2 - TSS region transcription start site region 44070
Tssr44071 4 136886189 to 136886200 11 - TSS region transcription start site region 44071
C1qc 4 136889802 to 136892932 3130 - protein coding gene complement component 1, q subcomponent, C chain
Tssr39724 4 136889804 to 136889815 11 + TSS region transcription start site region 39724
Tssr39725 4 136889964 to 136889988 24 + TSS region transcription start site region 39725
Tssr44072 4 136889999 to 136890042 43 - TSS region transcription start site region 44072
Tssr39726 4 136890001 to 136890113 112 + TSS region transcription start site region 39726
Tssr44073 4 136890056 to 136890063 7 - TSS region transcription start site region 44073
Tssr44074 4 136890088 to 136890099 11 - TSS region transcription start site region 44074
Tssr44075 4 136890133 to 136890144 11 - TSS region transcription start site region 44075
Tssr44076 4 136890157 to 136890162 5 - TSS region transcription start site region 44076
Tssr44077 4 136890250 to 136890255 5 - TSS region transcription start site region 44077
Tssr44078 4 136890283 to 136890294 11 - TSS region transcription start site region 44078
Tssr44079 4 136890303 to 136890315 12 - TSS region transcription start site region 44079
Tssr39727 4 136890323 to 136890355 32 + TSS region transcription start site region 39727
Tssr44080 4 136890326 to 136890343 17 - TSS region transcription start site region 44080
Tssr44081 4 136890354 to 136890365 11 - TSS region transcription start site region 44081
Tssr39728 4 136890358 to 136890403 45 + TSS region transcription start site region 39728
Tssr44082 4 136890371 to 136890384 13 - TSS region transcription start site region 44082
Tssr44083 4 136890417 to 136890422 5 - TSS region transcription start site region 44083
Tssr44084 4 136890439 to 136890448 9 - TSS region transcription start site region 44084
Tssr44085 4 136890504 to 136890507 3 - TSS region transcription start site region 44085
Tssr44086 4 136892485 to 136892593 108 - TSS region transcription start site region 44086
Tssr44087 4 136892850 to 136892854 4 - TSS region transcription start site region 44087
Tssr44088 4 136892861 to 136892864 3 - TSS region transcription start site region 44088
Tssr44089 4 136892867 to 136892937 70 - TSS region transcription start site region 44089
Tssr44090 4 136893092 to 136893098 6 - TSS region transcription start site region 44090
C1qa 4 136895917 to 136898803 2886 - protein coding gene complement component 1, q subcomponent, alpha polypeptide
Cpgi15120 4 136896092 to 136896289 197 CpG island CpG island 15120
Tssr44091 4 136896138 to 136896152 14 - TSS region transcription start site region 44091
Tssr44092 4 136896161 to 136896185 24 - TSS region transcription start site region 44092
Tssr44093 4 136896190 to 136896207 17 - TSS region transcription start site region 44093
Tssr44094 4 136896279 to 136896283 4 - TSS region transcription start site region 44094
Tssr44095 4 136896343 to 136896354 11 - TSS region transcription start site region 44095
Tssr44096 4 136896375 to 136896387 12 - TSS region transcription start site region 44096
Tssr44097 4 136896415 to 136896429 14 - TSS region transcription start site region 44097
Tssr44098 4 136898232 to 136898257 25 - TSS region transcription start site region 44098
Tssr44099 4 136898762 to 136898792 30 - TSS region transcription start site region 44099
Tssr44100 4 136898810 to 136898823 13 - TSS region transcription start site region 44100
Tssr44101 4 136898826 to 136898838 12 - TSS region transcription start site region 44101
Tssr44102 4 136898840 to 136898850 10 - TSS region transcription start site region 44102
Tssr39729 4 136909835 to 136909850 15 + TSS region transcription start site region 39729
Tssr39730 4 136909851 to 136909858 7 + TSS region transcription start site region 39730