MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:136379872-136579877

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm31295	4	136387466 to 136388993	1527	+	lncRNA gene	predicted gene, 31295
Htr1d	4	136423524 to 136444398	20874	+	protein coding gene	5-hydroxytryptamine (serotonin) receptor 1D
Tssr39707	4	136424056 to 136424067	11	+	TSS region	transcription start site region 39707
Cpgi15110	4	136424252 to 136425279	1027		CpG island	CpG island 15110
Tssr39708	4	136424574 to 136424590	16	+	TSS region	transcription start site region 39708
Cpgi15111	4	136442805 to 136443157	352		CpG island	CpG island 15111
Cpgi15112	4	136462056 to 136462959	903		CpG island	CpG island 15112
6030445D17Rik	4	136462250 to 136463977	1727	+	unclassified gene	RIKEN cDNA 6030445D17 gene
Tssr39709	4	136462582 to 136462623	41	+	TSS region	transcription start site region 39709
Cpgi15113	4	136469440 to 136470890	1450		CpG island	CpG island 15113
Luzp1	4	136469749 to 136554725	84976	+	protein coding gene	leucine zipper protein 1
Tssr39710	4	136469755 to 136469815	60	+	TSS region	transcription start site region 39710
Tssr39711	4	136479872 to 136479877	5	+	TSS region	transcription start site region 39711
Tssr39712	4	136495597 to 136495601	4	+	TSS region	transcription start site region 39712
Tssr39713	4	136538259 to 136538296	37	+	TSS region	transcription start site region 39713
Tssr39714	4	136540944 to 136540967	23	+	TSS region	transcription start site region 39714
Kdm1a	4	136550540 to 136602723	52183	-	protein coding gene	lysine (K)-specific demethylase 1A
Tssr44036	4	136574056 to 136574106	50	-	TSS region	transcription start site region 44036