Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Tlsr3 | 4 | 7565207 | QTL | thymic lymphoma suppressor region 3 | ||
Asap3 | 4 | 38851 | + | protein coding gene | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 | |
D230019A03Rik | 4 | 2082 | unclassified gene | RIKEN cDNA D230019A03 gene | ||
Cpgi15103 | 4 | 169 | CpG island | CpG island 15103 | ||
Cpgi15104 | 4 | 331 | CpG island | CpG island 15104 | ||
Cpgi15105 | 4 | 1159 | CpG island | CpG island 15105 | ||
Tssr39691 | 4 | 79 | + | TSS region | transcription start site region 39691 | |
Tcea3 | 4 | 26968 | + | protein coding gene | transcription elongation factor A (SII), 3 | |
Tssr39692 | 4 | 11 | + | TSS region | transcription start site region 39692 | |
Cpgi15106 | 4 | 266 | CpG island | CpG island 15106 | ||
Tssr44035 | 4 | 3 | - | TSS region | transcription start site region 44035 | |
Tssr39693 | 4 | 49 | + | TSS region | transcription start site region 39693 | |
Tssr39694 | 4 | 15 | + | TSS region | transcription start site region 39694 | |
Tssr39695 | 4 | 28 | + | TSS region | transcription start site region 39695 | |
Zfp46 | 4 | 9259 | + | protein coding gene | zinc finger protein 46 | |
Tssr39696 | 4 | 9 | + | TSS region | transcription start site region 39696 | |
Cpgi15107 | 4 | 713 | CpG island | CpG island 15107 | ||
Tssr39697 | 4 | 53 | + | TSS region | transcription start site region 39697 | |
Tssr39698 | 4 | 35 | + | TSS region | transcription start site region 39698 | |
Tssr39699 | 4 | 12 | + | TSS region | transcription start site region 39699 | |
Cpgi15108 | 4 | 1060 | CpG island | CpG island 15108 | ||
Gm13013 | 4 | 522 | - | pseudogene | predicted gene 13013 | |
Cpgi15109 | 4 | 1475 | CpG island | CpG island 15109 | ||
Tssr39700 | 4 | 11 | + | TSS region | transcription start site region 39700 | |
Hnrnpr | 4 | 35039 | + | protein coding gene | heterogeneous nuclear ribonucleoprotein R | |
Tssr39701 | 4 | 32 | + | TSS region | transcription start site region 39701 | |
Tssr39702 | 4 | 63 | + | TSS region | transcription start site region 39702 | |
Tssr39703 | 4 | 6 | + | TSS region | transcription start site region 39703 | |
Tssr39704 | 4 | 46 | + | TSS region | transcription start site region 39704 | |
Tssr39705 | 4 | 3 | + | TSS region | transcription start site region 39705 | |
Gm27022 | 4 | 1594 | - | lincRNA gene | predicted gene, 27022 | |
9130020K20Rik | 4 | 9113 | + | lncRNA gene | RIKEN cDNA 9130020K20 gene | |
Tssr39706 | 4 | 9 | + | TSS region | transcription start site region 39706 | |
D4Mit69 | 4 | 129 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 69 | ||
D4Dcr29 | 4 | 102 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 29 | ||
Gm31295 | 4 | 1527 | + | lncRNA gene | predicted gene, 31295 | |
Htr1d | 4 | 20874 | + | protein coding gene | 5-hydroxytryptamine (serotonin) receptor 1D | |
Tssr39707 | 4 | 11 | + | TSS region | transcription start site region 39707 | |
Cpgi15110 | 4 | 1027 | CpG island | CpG island 15110 | ||
Tssr39708 | 4 | 16 | + | TSS region | transcription start site region 39708 | |
Cpgi15111 | 4 | 352 | CpG island | CpG island 15111 | ||
Cpgi15112 | 4 | 903 | CpG island | CpG island 15112 | ||
6030445D17Rik | 4 | 1727 | + | unclassified gene | RIKEN cDNA 6030445D17 gene | |
Tssr39709 | 4 | 41 | + | TSS region | transcription start site region 39709 | |
Cpgi15113 | 4 | 1450 | CpG island | CpG island 15113 | ||
Luzp1 | 4 | 84976 | + | protein coding gene | leucine zipper protein 1 | |
Tssr39710 | 4 | 60 | + | TSS region | transcription start site region 39710 | |
Tssr39711 | 4 | 5 | + | TSS region | transcription start site region 39711 | |
Tssr39712 | 4 | 4 | + | TSS region | transcription start site region 39712 | |
Tssr39713 | 4 | 37 | + | TSS region | transcription start site region 39713 | |
Tssr39714 | 4 | 23 | + | TSS region | transcription start site region 39714 | |
Kdm1a | 4 | 52183 | - | protein coding gene | lysine (K)-specific demethylase 1A | |
Tssr44036 | 4 | 50 | - | TSS region | transcription start site region 44036 | |
Gm12987 | 4 | 488 | - | pseudogene | predicted gene 12987 | |
Tssr44037 | 4 | 31 | - | TSS region | transcription start site region 44037 | |
Cpgi15114 | 4 | 1123 | CpG island | CpG island 15114 | ||
Tssr44038 | 4 | 25 | - | TSS region | transcription start site region 44038 | |
Tssr44039 | 4 | 7 | - | TSS region | transcription start site region 44039 | |
Tssr44040 | 4 | 15 | - | TSS region | transcription start site region 44040 | |
Tssr44041 | 4 | 119 | - | TSS region | transcription start site region 44041 | |
Tssr44042 | 4 | 22 | - | TSS region | transcription start site region 44042 | |
Gm12986 | 4 | 966 | - | pseudogene | predicted gene 12986 | |
Gm22180 | 4 | 58 | - | miRNA gene | predicted gene, 22180 | |
Tssr39715 | 4 | 20 | + | TSS region | transcription start site region 39715 | |
Tex46 | 4 | 2789 | + | protein coding gene | testis expressed 46 | |
Tssr39716 | 4 | 9 | + | TSS region | transcription start site region 39716 | |
Lactbl1 | 4 | 16489 | + | protein coding gene | lactamase, beta-like 1 | |
Tssr39717 | 4 | 21 | + | TSS region | transcription start site region 39717 | |
Cpgi15115 | 4 | 1436 | CpG island | CpG island 15115 | ||
Gm37583 | 4 | 2486 | + | unclassified gene | predicted gene, 37583 | |
Tssr39718 | 4 | 3 | + | TSS region | transcription start site region 39718 | |
Ephb2 | 4 | 188449 | - | protein coding gene | Eph receptor B2 | |
Tssr39719 | 4 | 11 | + | TSS region | transcription start site region 39719 | |
Bllact2 | 4 | 0 | QTL | base line locomotor activity 2 | ||
Tssr44043 | 4 | 3 | - | TSS region | transcription start site region 44043 | |
Tssr44044 | 4 | 9 | - | TSS region | transcription start site region 44044 | |
Tssr44045 | 4 | 11 | - | TSS region | transcription start site region 44045 | |
Tssr44046 | 4 | 7 | - | TSS region | transcription start site region 44046 | |
Tssr44047 | 4 | 13 | - | TSS region | transcription start site region 44047 | |
Tssr44048 | 4 | 4 | - | TSS region | transcription start site region 44048 | |
Cpgi15116 | 4 | 409 | CpG island | CpG island 15116 | ||
Cpgi15117 | 4 | 787 | CpG island | CpG island 15117 | ||
Cpgi15118 | 4 | 203 | CpG island | CpG island 15118 | ||
Tssr44049 | 4 | 1 | - | TSS region | transcription start site region 44049 | |
Tssr39720 | 4 | 15 | + | TSS region | transcription start site region 39720 | |
Tssr44050 | 4 | 15 | - | TSS region | transcription start site region 44050 | |
Tssr44051 | 4 | 17 | - | TSS region | transcription start site region 44051 | |
Cpgi15119 | 4 | 2031 | CpG island | CpG island 15119 | ||
Tssr44052 | 4 | 15 | - | TSS region | transcription start site region 44052 | |
Gm31536 | 4 | 6048 | + | lncRNA gene | predicted gene, 31536 | |
C1qb | 4 | 6032 | - | protein coding gene | complement component 1, q subcomponent, beta polypeptide | |
Tssr44053 | 4 | 12 | - | TSS region | transcription start site region 44053 | |
Tssr44054 | 4 | 11 | - | TSS region | transcription start site region 44054 | |
Tssr44055 | 4 | 9 | - | TSS region | transcription start site region 44055 | |
Tssr44056 | 4 | 18 | - | TSS region | transcription start site region 44056 | |
Tssr39721 | 4 | 13 | + | TSS region | transcription start site region 39721 | |
Tssr44057 | 4 | 14 | - | TSS region | transcription start site region 44057 | |
Tssr39722 | 4 | 59 | + | TSS region | transcription start site region 39722 | |
Tssr44058 | 4 | 12 | - | TSS region | transcription start site region 44058 | |
Tssr44059 | 4 | 16 | - | TSS region | transcription start site region 44059 | |
Tssr39723 | 4 | 52 | + | TSS region | transcription start site region 39723 | |
Tssr44060 | 4 | 19 | - | TSS region | transcription start site region 44060 | |
Tssr44061 | 4 | 30 | - | TSS region | transcription start site region 44061 | |
Tssr44062 | 4 | 9 | - | TSS region | transcription start site region 44062 | |
Tssr44063 | 4 | 11 | - | TSS region | transcription start site region 44063 | |
Tssr44064 | 4 | 20 | - | TSS region | transcription start site region 44064 | |
Tssr44065 | 4 | 37 | - | TSS region | transcription start site region 44065 | |
Tssr44066 | 4 | 15 | - | TSS region | transcription start site region 44066 | |
Tssr44067 | 4 | 39 | - | TSS region | transcription start site region 44067 | |
Tssr44068 | 4 | 44 | - | TSS region | transcription start site region 44068 | |
Tssr44069 | 4 | 13 | - | TSS region | transcription start site region 44069 | |
Tssr44070 | 4 | 2 | - | TSS region | transcription start site region 44070 | |
Tssr44071 | 4 | 11 | - | TSS region | transcription start site region 44071 | |
C1qc | 4 | 3130 | - | protein coding gene | complement component 1, q subcomponent, C chain | |
Tssr39724 | 4 | 11 | + | TSS region | transcription start site region 39724 | |
Tssr39725 | 4 | 24 | + | TSS region | transcription start site region 39725 | |
Tssr44072 | 4 | 43 | - | TSS region | transcription start site region 44072 | |
Tssr39726 | 4 | 112 | + | TSS region | transcription start site region 39726 | |
Tssr44073 | 4 | 7 | - | TSS region | transcription start site region 44073 | |
Tssr44074 | 4 | 11 | - | TSS region | transcription start site region 44074 | |
Tssr44075 | 4 | 11 | - | TSS region | transcription start site region 44075 | |
Tssr44076 | 4 | 5 | - | TSS region | transcription start site region 44076 | |
Tssr44077 | 4 | 5 | - | TSS region | transcription start site region 44077 | |
Tssr44078 | 4 | 11 | - | TSS region | transcription start site region 44078 | |
Tssr44079 | 4 | 12 | - | TSS region | transcription start site region 44079 | |
Tssr39727 | 4 | 32 | + | TSS region | transcription start site region 39727 | |
Tssr44080 | 4 | 17 | - | TSS region | transcription start site region 44080 | |
Tssr44081 | 4 | 11 | - | TSS region | transcription start site region 44081 | |
Tssr39728 | 4 | 45 | + | TSS region | transcription start site region 39728 | |
Tssr44082 | 4 | 13 | - | TSS region | transcription start site region 44082 | |
Tssr44083 | 4 | 5 | - | TSS region | transcription start site region 44083 | |
Tssr44084 | 4 | 9 | - | TSS region | transcription start site region 44084 | |
Tssr44085 | 4 | 3 | - | TSS region | transcription start site region 44085 | |
Tssr44086 | 4 | 108 | - | TSS region | transcription start site region 44086 | |
Tssr44087 | 4 | 4 | - | TSS region | transcription start site region 44087 | |
Tssr44088 | 4 | 3 | - | TSS region | transcription start site region 44088 | |
Tssr44089 | 4 | 70 | - | TSS region | transcription start site region 44089 | |
Tssr44090 | 4 | 6 | - | TSS region | transcription start site region 44090 | |
C1qa | 4 | 2886 | - | protein coding gene | complement component 1, q subcomponent, alpha polypeptide | |
Cpgi15120 | 4 | 197 | CpG island | CpG island 15120 | ||
Tssr44091 | 4 | 14 | - | TSS region | transcription start site region 44091 | |
Tssr44092 | 4 | 24 | - | TSS region | transcription start site region 44092 | |
Tssr44093 | 4 | 17 | - | TSS region | transcription start site region 44093 | |
Tssr44094 | 4 | 4 | - | TSS region | transcription start site region 44094 | |
Tssr44095 | 4 | 11 | - | TSS region | transcription start site region 44095 | |
Tssr44096 | 4 | 12 | - | TSS region | transcription start site region 44096 | |
Tssr44097 | 4 | 14 | - | TSS region | transcription start site region 44097 | |
Tssr44098 | 4 | 25 | - | TSS region | transcription start site region 44098 | |
Tssr44099 | 4 | 30 | - | TSS region | transcription start site region 44099 | |
Tssr44100 | 4 | 13 | - | TSS region | transcription start site region 44100 | |
Tssr44101 | 4 | 12 | - | TSS region | transcription start site region 44101 | |
Tssr44102 | 4 | 10 | - | TSS region | transcription start site region 44102 | |
Tssr39729 | 4 | 15 | + | TSS region | transcription start site region 39729 | |
Tssr39730 | 4 | 7 | + | TSS region | transcription start site region 39730 | |
D4Mit251 | 4 | 113 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 251 | ||
Epha8 | 4 | 27397 | - | protein coding gene | Eph receptor A8 | |
Tssr1344 | 4 | 2 | + | TSS region | transcription start site region 1344 | |
Tssr39731 | 4 | 3 | + | TSS region | transcription start site region 39731 | |
Tssr39732 | 4 | 10 | + | TSS region | transcription start site region 39732 | |
Tssr39733 | 4 | 26 | + | TSS region | transcription start site region 39733 | |
Tssr39734 | 4 | 15 | + | TSS region | transcription start site region 39734 | |
Tssr39735 | 4 | 5 | + | TSS region | transcription start site region 39735 | |
Tssr39736 | 4 | 6 | + | TSS region | transcription start site region 39736 | |
Cpgi15121 | 4 | 1564 | CpG island | CpG island 15121 | ||
Tssr44103 | 4 | 7 | - | TSS region | transcription start site region 44103 | |
Tssr44104 | 4 | 87 | - | TSS region | transcription start site region 44104 | |
Zbtb40 | 4 | 69069 | - | protein coding gene | zinc finger and BTB domain containing 40 | |
Tssr44105 | 4 | 4 | - | TSS region | transcription start site region 44105 | |
Gm23834 | 4 | 128 | + | snoRNA gene | predicted gene, 23834 | |
Cpgi15122 | 4 | 1177 | CpG island | CpG island 15122 | ||
Tssr44106 | 4 | 30 | - | TSS region | transcription start site region 44106 | |
Gm31648 | 4 | 18506 | + | lncRNA gene | predicted gene, 31648 | |
1700037C06Rik | 4 | 873 | - | lincRNA gene | RIKEN cDNA 1700037C06 gene | |
Gm13001 | 4 | 1000 | - | lincRNA gene | predicted gene 13001 | |
Cpgi15123 | 4 | 225 | CpG island | CpG island 15123 | ||
Tssr44107 | 4 | 30 | - | TSS region | transcription start site region 44107 | |
Tssr39737 | 4 | 4 | + | TSS region | transcription start site region 39737 | |
Bis1 | 4 | 103 | QTL | beta-carboline-induced seizures 1 | ||
Bw8q2 | 4 | 103 | QTL | body weight at 8 weeks QTL 2 | ||
D4Mit68 | 4 | 103 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 68 | ||
Gm31762 | 4 | 2962 | - | lncRNA gene | predicted gene, 31762 | |
Tssr39738 | 4 | 4 | + | TSS region | transcription start site region 39738 | |
Cpgi15124 | 4 | 208 | CpG island | CpG island 15124 | ||
Ssrq8 | 4 | 741995 | QTL | stress response QTL 8 | ||
D4Mit148 | 4 | 127 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 148 | ||
Shm2 | 4 | 1466753 | QTL | sperm head morphology 2 | ||
Gm13003 | 4 | 5984 | - | lincRNA gene | predicted gene 13003 | |
Tssr44108 | 4 | 18 | - | TSS region | transcription start site region 44108 | |
Gm46872 | 4 | 6787 | - | lncRNA gene | predicted gene, 46872 | |
Gm25399 | 4 | 75 | + | miRNA gene | predicted gene, 25399 | |
Gm23263 | 4 | 75 | + | miRNA gene | predicted gene, 23263 | |
Gm31820 | 4 | 68680 | - | lncRNA gene | predicted gene, 31820 | |
Gm13005 | 4 | 639 | - | pseudogene | predicted gene 13005 | |
Gm13002 | 4 | 681 | - | pseudogene | predicted gene 13002 | |
Tssr44109 | 4 | 3 | - | TSS region | transcription start site region 44109 | |
D4Mit282 | 4 | 121 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 282 |