Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:136017221-136277248

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eloa 4 136003370 to 136021649 18279 - protein coding gene elongin A
Gm24362 4 136018071 to 136018486 415 - sense intronic lncRNA gene predicted gene, 24362
Cpgi15090 4 136020946 to 136022114 1168 CpG island CpG island 15090
Tssr44023 4 136021629 to 136021665 36 - TSS region transcription start site region 44023
Tssr44024 4 136021685 to 136021694 9 - TSS region transcription start site region 44024
Tssr44025 4 136021722 to 136021736 14 - TSS region transcription start site region 44025
Cpgi15091 4 136028335 to 136028511 176 CpG island CpG island 15091
Tssr44026 4 136028847 to 136028897 50 - TSS region transcription start site region 44026
Rpl11 4 136049947 to 136053371 3424 - protein coding gene ribosomal protein L11
Cpgi15092 4 136052439 to 136053546 1107 CpG island CpG island 15092
Tssr44027 4 136053343 to 136053415 72 - TSS region transcription start site region 44027
Cpgi15093 4 136069990 to 136070283 293 CpG island CpG island 15093
Cpgi15094 4 136071267 to 136071528 261 CpG island CpG island 15094
Gm13009 4 136074513 to 136074972 459 - pseudogene predicted gene 13009
Cpgi15095 4 136081638 to 136082277 639 CpG island CpG island 15095
Tssr39666 4 136081985 to 136082007 22 + TSS region transcription start site region 39666
Cpgi15096 4 136134929 to 136135619 690 CpG island CpG island 15096
Gm26001 4 136137496 to 136137598 102 + snRNA gene predicted gene, 26001
Gm42329 4 136138595 to 136143352 4757 - lncRNA gene predicted gene, 42329
Cpgi15097 4 136140303 to 136140672 369 CpG island CpG island 15097
Tssr1343 4 136140763 to 136140767 4 + TSS region transcription start site region 1343
Tssr44028 4 136142214 to 136142228 14 - TSS region transcription start site region 44028
Cpgi15098 4 136143580 to 136145154 1574 CpG island CpG island 15098
Tssr39667 4 136143816 to 136143832 16 + TSS region transcription start site region 39667
Id3 4 136143822 to 136145392 1570 + protein coding gene inhibitor of DNA binding 3
Tssr39668 4 136144772 to 136144804 32 + TSS region transcription start site region 39668
Tssr39669 4 136147221 to 136147248 27 + TSS region transcription start site region 39669
Cpgi15099 4 136147533 to 136148704 1171 CpG island CpG island 15099
Cpgi15100 4 136171953 to 136173417 1464 CpG island CpG island 15100
Tssr39670 4 136172266 to 136172288 22 + TSS region transcription start site region 39670
Tssr44029 4 136172318 to 136172323 5 - TSS region transcription start site region 44029
Tssr39671 4 136172367 to 136172395 28 + TSS region transcription start site region 39671
E2f2 4 136172394 to 136196057 23663 + protein coding gene E2F transcription factor 2
Tssr39672 4 136172396 to 136172427 31 + TSS region transcription start site region 39672
Tssr39673 4 136172428 to 136172442 14 + TSS region transcription start site region 39673
Tssr39674 4 136172558 to 136172579 21 + TSS region transcription start site region 39674
Tssr44030 4 136172601 to 136172604 3 - TSS region transcription start site region 44030
Tssr39675 4 136172666 to 136172753 87 + TSS region transcription start site region 39675
Tssr39676 4 136172850 to 136172860 10 + TSS region transcription start site region 39676
Tssr39677 4 136172945 to 136172956 11 + TSS region transcription start site region 39677
Tssr44031 4 136173038 to 136173047 9 - TSS region transcription start site region 44031
Tssr39678 4 136173167 to 136173178 11 + TSS region transcription start site region 39678
Tssr39679 4 136177936 to 136177957 21 + TSS region transcription start site region 39679
Tssr39680 4 136178212 to 136178235 23 + TSS region transcription start site region 39680
Tssr39681 4 136178240 to 136178253 13 + TSS region transcription start site region 39681
Tssr39682 4 136178273 to 136178286 13 + TSS region transcription start site region 39682
Cpgi15101 4 136180068 to 136180507 439 CpG island CpG island 15101
Tssr39683 4 136180198 to 136180211 13 + TSS region transcription start site region 39683
Tssr44032 4 136180501 to 136180514 13 - TSS region transcription start site region 44032
Tssr44033 4 136180529 to 136180540 11 - TSS region transcription start site region 44033
Tssr44034 4 136180548 to 136180571 23 - TSS region transcription start site region 44034
Tssr39684 4 136180775 to 136180790 15 + TSS region transcription start site region 39684
Tssr39685 4 136180792 to 136180809 17 + TSS region transcription start site region 39685
Tssr39686 4 136181143 to 136181164 21 + TSS region transcription start site region 39686
Tssr39687 4 136189499 to 136189502 3 + TSS region transcription start site region 39687
Tssr39688 4 136192908 to 136192920 12 + TSS region transcription start site region 39688
Cpgi15102 4 136206014 to 136206765 751 CpG island CpG island 15102
Asap3 4 136206365 to 136245216 38851 + protein coding gene ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
Tssr39689 4 136206379 to 136206405 26 + TSS region transcription start site region 39689
Tssr39690 4 136206411 to 136206454 43 + TSS region transcription start site region 39690
D230019A03Rik 4 136214468 to 136216550 2082 unclassified gene RIKEN cDNA D230019A03 gene
Cpgi15103 4 136218747 to 136218916 169 CpG island CpG island 15103
Cpgi15104 4 136238383 to 136238714 331 CpG island CpG island 15104
Cpgi15105 4 136247683 to 136248842 1159 CpG island CpG island 15105
Tssr39691 4 136247932 to 136248011 79 + TSS region transcription start site region 39691
Tcea3 4 136247935 to 136274903 26968 + protein coding gene transcription elongation factor A (SII), 3
Tssr39692 4 136248017 to 136248028 11 + TSS region transcription start site region 39692
Cpgi15106 4 136249234 to 136249500 266 CpG island CpG island 15106
Tssr44035 4 136249940 to 136249943 3 - TSS region transcription start site region 44035
Tssr39693 4 136270997 to 136271046 49 + TSS region transcription start site region 39693