Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:135959947-136143371

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hmgcl 4 135946449 to 135962617 16168 + protein coding gene 3-hydroxy-3-methylglutaryl-Coenzyme A lyase
Cpgi15086 4 135963178 to 135964615 1437 CpG island CpG island 15086
Tssr39662 4 135963720 to 135963733 13 + TSS region transcription start site region 39662
Gale 4 135963727 to 135968178 4451 + protein coding gene galactose-4-epimerase, UDP
Tssr39663 4 135963742 to 135963760 18 + TSS region transcription start site region 39663
Lypla2 4 135968224 to 135972594 4370 - protein coding gene lysophospholipase 2
Tssr39664 4 135968658 to 135968660 2 + TSS region transcription start site region 39664
Tssr44008 4 135969485 to 135969508 23 - TSS region transcription start site region 44008
Tssr44009 4 135970073 to 135970089 16 - TSS region transcription start site region 44009
Tssr44010 4 135971894 to 135971908 14 - TSS region transcription start site region 44010
Cpgi15087 4 135972180 to 135972983 803 CpG island CpG island 15087
Tssr44011 4 135972548 to 135972567 19 - TSS region transcription start site region 44011
Tssr44012 4 135972574 to 135972618 44 - TSS region transcription start site region 44012
Tssr44013 4 135972620 to 135972631 11 - TSS region transcription start site region 44013
Tssr44014 4 135973493 to 135973516 23 - TSS region transcription start site region 44014
Tssr44015 4 135973522 to 135973531 9 - TSS region transcription start site region 44015
Tssr44016 4 135973638 to 135973683 45 - TSS region transcription start site region 44016
Pithd1 4 135975602 to 135987244 11642 - protein coding gene PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
Cpgi15088 4 135986522 to 135987668 1146 CpG island CpG island 15088
Tssr44017 4 135987013 to 135987018 5 - TSS region transcription start site region 44017
Tssr44018 4 135987156 to 135987179 23 - TSS region transcription start site region 44018
Tssr44019 4 135987182 to 135987269 87 - TSS region transcription start site region 44019
Tssr44020 4 135988075 to 135988117 42 - TSS region transcription start site region 44020
Tssr39665 4 135997427 to 135997431 4 + TSS region transcription start site region 39665
Cpgi15089 4 135997433 to 135997637 204 CpG island CpG island 15089
Gm13007 4 135997523 to 135997887 364 + pseudogene predicted gene 13007
Eloa 4 136003370 to 136021649 18279 - protein coding gene elongin A
Gm13008 4 136003566 to 136010937 7371 + antisense lncRNA gene predicted gene 13008
Tssr44021 4 136005238 to 136005242 4 - TSS region transcription start site region 44021
Tssr44022 4 136010534 to 136010545 11 - TSS region transcription start site region 44022
Gm24362 4 136018071 to 136018486 415 - sense intronic lncRNA gene predicted gene, 24362
Cpgi15090 4 136020946 to 136022114 1168 CpG island CpG island 15090
Tssr44023 4 136021629 to 136021665 36 - TSS region transcription start site region 44023
Tssr44024 4 136021685 to 136021694 9 - TSS region transcription start site region 44024
Tssr44025 4 136021722 to 136021736 14 - TSS region transcription start site region 44025
Cpgi15091 4 136028335 to 136028511 176 CpG island CpG island 15091
Tssr44026 4 136028847 to 136028897 50 - TSS region transcription start site region 44026
Rpl11 4 136049947 to 136053371 3424 - protein coding gene ribosomal protein L11
Cpgi15092 4 136052439 to 136053546 1107 CpG island CpG island 15092
Tssr44027 4 136053343 to 136053415 72 - TSS region transcription start site region 44027
Cpgi15093 4 136069990 to 136070283 293 CpG island CpG island 15093
Cpgi15094 4 136071267 to 136071528 261 CpG island CpG island 15094
Gm13009 4 136074513 to 136074972 459 - pseudogene predicted gene 13009
Cpgi15095 4 136081638 to 136082277 639 CpG island CpG island 15095
Tssr39666 4 136081985 to 136082007 22 + TSS region transcription start site region 39666
Cpgi15096 4 136134929 to 136135619 690 CpG island CpG island 15096
Gm26001 4 136137496 to 136137598 102 + snRNA gene predicted gene, 26001
Gm42329 4 136138595 to 136143352 4757 - lncRNA gene predicted gene, 42329
Cpgi15097 4 136140303 to 136140672 369 CpG island CpG island 15097
Tssr1343 4 136140763 to 136140767 4 + TSS region transcription start site region 1343
Tssr44028 4 136142214 to 136142228 14 - TSS region transcription start site region 44028