MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:135495230-135595242

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi15074	4	135494445 to 135495293	848		CpG island	CpG island 15074
Stpg1	4	135494886 to 135537803	42917	+	protein coding gene	sperm tail PG rich repeat containing 1
Tssr39617	4	135495952 to 135495959	7	+	TSS region	transcription start site region 39617
Tssr39618	4	135495962 to 135495967	5	+	TSS region	transcription start site region 39618
Tssr39619	4	135495969 to 135495974	5	+	TSS region	transcription start site region 39619
Tssr39620	4	135495979 to 135496016	37	+	TSS region	transcription start site region 39620
Tssr43995	4	135507610 to 135507622	12	-	TSS region	transcription start site region 43995
Gm25317	4	135512351 to 135512479	128	-	miRNA gene	predicted gene, 25317
D4Mit157	4	135538850 to 135538987	137		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 157
Grhl3	4	135541887 to 135573625	31738	-	protein coding gene	grainyhead like transcription factor 3
Tssr39621	4	135545230 to 135545242	12	+	TSS region	transcription start site region 39621
Cpgi15075	4	135570333 to 135570594	261		CpG island	CpG island 15075
Cpgi15076	4	135573224 to 135573714	490		CpG island	CpG island 15076
Tssr43996	4	135573532 to 135573552	20	-	TSS region	transcription start site region 43996
Gm30888	4	135573580 to 135580174	6594	+	lncRNA gene	predicted gene, 30888
Tssr43997	4	135573623 to 135573643	20	-	TSS region	transcription start site region 43997
Tssr39622	4	135578730 to 135578743	13	+	TSS region	transcription start site region 39622
Gm23106	4	135583748 to 135583848	100	+	snRNA gene	predicted gene, 23106