Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:135312112-135442137

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr39608 4 135312961 to 135312986 25 + TSS region transcription start site region 39608
Srrm1 4 135320484 to 135353253 32769 - protein coding gene serine/arginine repetitive matrix 1
Tssr43979 4 135325171 to 135325188 17 - TSS region transcription start site region 43979
Tssr43980 4 135325317 to 135325327 10 - TSS region transcription start site region 43980
Tssr43981 4 135325970 to 135325976 6 - TSS region transcription start site region 43981
Tssr43982 4 135334213 to 135334218 5 - TSS region transcription start site region 43982
Tssr39609 4 135337767 to 135337770 3 + TSS region transcription start site region 39609
Tssr39610 4 135337784 to 135337793 9 + TSS region transcription start site region 39610
Tssr39611 4 135337798 to 135337805 7 + TSS region transcription start site region 39611
Tssr43983 4 135337909 to 135337922 13 - TSS region transcription start site region 43983
Tssr43984 4 135338064 to 135338078 14 - TSS region transcription start site region 43984
Cpgi15070 4 135352266 to 135353807 1541 CpG island CpG island 15070
Tssr43985 4 135353126 to 135353157 31 - TSS region transcription start site region 43985
Tssr43986 4 135353164 to 135353177 13 - TSS region transcription start site region 43986
Tssr43987 4 135353625 to 135353628 3 - TSS region transcription start site region 43987
Tssr39612 4 135357725 to 135357734 9 + TSS region transcription start site region 39612
Ncmap 4 135369576 to 135398227 28651 - protein coding gene noncompact myelin associated protein
Tssr39613 4 135377112 to 135377137 25 + TSS region transcription start site region 39613
Gm12991 4 135377158 to 135377235 77 + pseudogene predicted gene 12991
Tssr43988 4 135380765 to 135380779 14 - TSS region transcription start site region 43988
Tssr43989 4 135380811 to 135380839 28 - TSS region transcription start site region 43989
Cpgi15071 4 135397737 to 135398499 762 CpG island CpG island 15071
Tssr39614 4 135398313 to 135398335 22 + TSS region transcription start site region 39614
Gm12990 4 135403189 to 135403656 467 - pseudogene predicted gene 12990
Rcan3 4 135412308 to 135433853 21545 - protein coding gene regulator of calcineurin 3
Mir700 4 135416555 to 135416633 78 - miRNA gene microRNA 700
Gm30822 4 135420678 to 135427794 7116 + lncRNA gene predicted gene, 30822
Tssr43990 4 135428712 to 135428721 9 - TSS region transcription start site region 43990
Gm15979 4 135430126 to 135430841 715 - sense intronic lncRNA gene predicted gene 15979
Cpgi15072 4 135433171 to 135434553 1382 CpG island CpG island 15072
Tssr43991 4 135433744 to 135433869 125 - TSS region transcription start site region 43991
Tssr39615 4 135434016 to 135434020 4 + TSS region transcription start site region 39615
Tssr39616 4 135439430 to 135439440 10 + TSS region transcription start site region 39616