MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:135083421-135204285

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm16225	4	135118221 to 135120447	2226	-	lincRNA gene	predicted gene 16225
Tssr43949	4	135120466 to 135120504	38	-	TSS region	transcription start site region 43949
Tssr39600	4	135120640 to 135120660	20	+	TSS region	transcription start site region 39600
Runx3	4	135120652 to 135177990	57338	+	protein coding gene	runt related transcription factor 3
Tssr39601	4	135120923 to 135120934	11	+	TSS region	transcription start site region 39601
Tssr43950	4	135131214 to 135131246	32	-	TSS region	transcription start site region 43950
Cpgi15060	4	135140711 to 135141026	315		CpG island	CpG island 15060
Gm16224	4	135143421 to 135144285	864	-	antisense lncRNA gene	predicted gene 16224
Cpgi15061	4	135150423 to 135150986	563		CpG island	CpG island 15061
Cpgi15062	4	135151278 to 135151545	267		CpG island	CpG island 15062
Cpgi15063	4	135151829 to 135154013	2184		CpG island	CpG island 15063
Tssr1337	4	135152273 to 135152293	20	+	TSS region	transcription start site region 1337
Tssr39602	4	135152536 to 135152554	18	+	TSS region	transcription start site region 39602
Tssr39603	4	135152702 to 135152748	46	+	TSS region	transcription start site region 39603
Tssr39604	4	135152994 to 135153024	30	+	TSS region	transcription start site region 39604
Cpgi15064	4	135155191 to 135155597	406		CpG island	CpG island 15064
Cpgi15065	4	135175214 to 135175883	669		CpG island	CpG island 15065
Tssr39605	4	135176105 to 135176127	22	+	TSS region	transcription start site region 39605
Cpgi15066	4	135201884 to 135202142	258		CpG island	CpG island 15066