Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:134969599-135169613

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15058 4 135025727 to 135026042 315 CpG island CpG island 15058
Gm42327 4 135043698 to 135051367 7669 - lncRNA gene predicted gene, 42327
Cpgi15059 4 135053676 to 135053912 236 CpG island CpG island 15059
Tssr1336 4 135069599 to 135069613 14 - TSS region transcription start site region 1336
Tssr43948 4 135073570 to 135073574 4 - TSS region transcription start site region 43948
Gm16225 4 135118221 to 135120447 2226 - lincRNA gene predicted gene 16225
Tssr43949 4 135120466 to 135120504 38 - TSS region transcription start site region 43949
Tssr39600 4 135120640 to 135120660 20 + TSS region transcription start site region 39600
Runx3 4 135120652 to 135177990 57338 + protein coding gene runt related transcription factor 3
Tssr39601 4 135120923 to 135120934 11 + TSS region transcription start site region 39601
Tssr43950 4 135131214 to 135131246 32 - TSS region transcription start site region 43950
Cpgi15060 4 135140711 to 135141026 315 CpG island CpG island 15060
Gm16224 4 135143421 to 135144285 864 - antisense lncRNA gene predicted gene 16224
Cpgi15061 4 135150423 to 135150986 563 CpG island CpG island 15061
Cpgi15062 4 135151278 to 135151545 267 CpG island CpG island 15062
Cpgi15063 4 135151829 to 135154013 2184 CpG island CpG island 15063
Tssr1337 4 135152273 to 135152293 20 + TSS region transcription start site region 1337
Tssr39602 4 135152536 to 135152554 18 + TSS region transcription start site region 39602
Tssr39603 4 135152702 to 135152748 46 + TSS region transcription start site region 39603
Tssr39604 4 135152994 to 135153024 30 + TSS region transcription start site region 39604
Cpgi15064 4 135155191 to 135155597 406 CpG island CpG island 15064