Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:134358692-134523283

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Extl1 4 134356373 to 134372552 16179 - protein coding gene exostoses (multiple)-like 1
D4Mit339.2 4 134367263 to 134367439 176 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 339.2
D4Mit339 4 134367426 to 134367547 121 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 339
Cpgi15037 4 134370980 to 134371535 555 CpG island CpG island 15037
Tssr43895 4 134371614 to 134371634 20 - TSS region transcription start site region 43895
Tssr43896 4 134372529 to 134372561 32 - TSS region transcription start site region 43896
Tssr43897 4 134372575 to 134372589 14 - TSS region transcription start site region 43897
Gm5589 4 134384932 to 134386977 2045 unclassified gene predicted gene 5589
Cpgi15038 4 134395995 to 134396384 389 CpG island CpG island 15038
Pafah2 4 134396320 to 134427412 31092 + protein coding gene platelet-activating factor acetylhydrolase 2
Tssr39557 4 134396359 to 134396409 50 + TSS region transcription start site region 39557
Tssr39558 4 134397306 to 134397326 20 + TSS region transcription start site region 39558
Tssr39559 4 134397380 to 134397400 20 + TSS region transcription start site region 39559
Cpgi15039 4 134401114 to 134401507 393 CpG island CpG island 15039
Tssr39560 4 134401303 to 134401325 22 + TSS region transcription start site region 39560
Tssr39561 4 134401609 to 134401630 21 + TSS region transcription start site region 39561
Tssr39562 4 134401659 to 134401674 15 + TSS region transcription start site region 39562
Tssr43898 4 134402059 to 134402070 11 - TSS region transcription start site region 43898
Tssr39563 4 134402175 to 134402190 15 + TSS region transcription start site region 39563
Gm30453 4 134433692 to 134448283 14591 - lncRNA gene predicted gene, 30453
Cpgi15040 4 134437000 to 134437170 170 CpG island CpG island 15040
1700021N21Rik 4 134448766 to 134450171 1405 - antisense lncRNA gene RIKEN cDNA 1700021N21 gene
Cpgi15041 4 134453838 to 134454023 185 CpG island CpG island 15041
Cpgi15042 4 134467662 to 134469367 1705 CpG island CpG island 15042
Stmn1 4 134468320 to 134473843 5523 + protein coding gene stathmin 1
Tssr39564 4 134468334 to 134468406 72 + TSS region transcription start site region 39564
Gm23634 4 134468364 to 134468454 90 + miRNA gene predicted gene, 23634
Tssr1332 4 134470098 to 134470111 13 + TSS region transcription start site region 1332
Tssr39565 4 134470746 to 134470772 26 + TSS region transcription start site region 39565
Tssr1333 4 134472808 to 134472821 13 + TSS region transcription start site region 1333
Gm13250 4 134493210 to 134493716 506 + pseudogene predicted gene 13250
Tssr39566 4 134493621 to 134493623 2 + TSS region transcription start site region 39566
Cpgi15043 4 134496711 to 134497231 520 CpG island CpG island 15043
Paqr7 4 134496761 to 134510237 13476 + protein coding gene progestin and adipoQ receptor family member VII
Tssr39567 4 134496865 to 134496909 44 + TSS region transcription start site region 39567
Tssr39568 4 134496966 to 134496988 22 + TSS region transcription start site region 39568
Tssr39569 4 134496996 to 134497013 17 + TSS region transcription start site region 39569
Tssr39570 4 134502236 to 134502250 14 + TSS region transcription start site region 39570
Tssr39571 4 134506671 to 134506676 5 + TSS region transcription start site region 39571
Cpgi15044 4 134506916 to 134507139 223 CpG island CpG island 15044
Tssr1334 4 134507596 to 134507620 24 + TSS region transcription start site region 1334
Cpgi15045 4 134510857 to 134511429 572 CpG island CpG island 15045
Aunip 4 134510999 to 134523922 12923 + protein coding gene aurora kinase A and ninein interacting protein
Tssr39572 4 134511002 to 134511076 74 + TSS region transcription start site region 39572
Tssr43899 4 134517578 to 134517587 9 - TSS region transcription start site region 43899
Tssr43900 4 134517588 to 134517597 9 - TSS region transcription start site region 43900
Tssr43901 4 134517901 to 134517912 11 - TSS region transcription start site region 43901